KEGG   Clostridioides difficile 630: CD630_13140
Entry
CD630_13140       CDS       T00487                                 

Gene name
truB
Definition
(RefSeq) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
cdf  Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:cdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cdf03016]
    CD630_13140 (truB)
Enzymes [BR:cdf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CD630_13140 (truB)
Transfer RNA biogenesis [BR:cdf03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CD630_13140 (truB)
 Prokaryotic type
    CD630_13140 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 DUF4318
Other DBs
NCBI-GeneID: 4914473
NCBI-ProteinID: YP_001087809
UniProt: Q18BH7
Position
1523747..1524652
AA seq 301 aa
MNKIISILKPTGMTSHDVVSRVRKILNIKKVGHTGTLDPDASGVLPICIGKATKVCEVIL
NKDKSYICELTLGISTDTYDASGEILKKVDDFKFSNEDIERAFDTQRGEINQLPPIYSAL
KVNGKRMCDLVRSGRQSEITLKTRRVNIKDIKILSIKGNKVMFYVECSKGTYVRSICHDI
GEYLGCGAHMSFLNRTSSGKFDLDNSITLEELELFYENKTLDKYLYDIDYVLDSFNYVVL
NPNAIKYYSNGGSIDDKRFLKNNFDKDDEFVRVYSTDNFLGLGKLSKHNNTISVKSDKMF
I
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaataagattataagtatattgaaacccacaggtatgacatctcatgatgttgtaagt
agagtgagaaagattttaaatataaaaaaagttggtcatacaggtactcttgacccagat
gcttcaggtgttttaccaatctgtatagggaaagctacaaaagtatgtgaagttatttta
aacaaagataaatcgtatatatgtgagcttactttaggtataagtacagatacttatgat
gcttcaggtgaaattttaaaaaaagttgatgattttaaatttagtaatgaagacatagaa
agagcttttgacacacaaagaggagagataaatcaacttcctccaatttattcagcttta
aaggtaaatggaaagagaatgtgtgatttagtaagaagtggtagacaatctgaaattact
ttaaaaacaagaagagtaaatataaaagacataaaaatactaagtataaaaggtaataaa
gtaatgttttatgttgagtgttctaaagggacttatgtgagaagcatttgccatgatata
ggagaatatctaggttgtggagctcatatgtcgtttttgaatagaacatcttctggtaaa
tttgacttagataattcaataacattagaagaattagaattattttatgaaaataaaact
ttagacaaatacttatatgatatagattatgtccttgattcgtttaattatgttgtatta
aaccctaatgctataaaatattatagtaatggtggctcaatagatgataaaaggttttta
aaaaataatttcgataaagatgatgaatttgtaagagtatacagtacagataatttctta
ggattaggaaaattatcaaaacacaataatacaataagtgttaaaagtgataagatgttc
atataa

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