KEGG   Camelus dromedarius (Arabian camel): 105104757
Entry
105104757         CDS       T04642                                 
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
cdk  Camelus dromedarius (Arabian camel)
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cdk03016]
    105104757 (TRUB1)
Enzymes [BR:cdk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     105104757 (TRUB1)
Transfer RNA biogenesis [BR:cdk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    105104757 (TRUB1)
 Prokaryotic type
    105104757 (TRUB1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-GeneID: 105104757
NCBI-ProteinID: XP_010996817
UniProt: A0A5N4DKK8
Position
11:70326396..70358108
AA seq 350 aa
MAAAEAAVGSSSSLKTDTVPVPESAGTAAATAATSSATAAAAAVAAAVRTGSEARVSKPA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGKGTKMLTNMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEAVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPGELALKKSKPEESNEQMLSCEYISLNETKGEDDVIKTF
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcagctgctgaggcggcggtggggtcgtcgtcatctttgaaaacagacacagtccca
gttcctgaaagtgcaggaacagctgcagcaacggccgccacctcctcagcgacggctgca
gccgcggcagttgcggccgcggtcaggaccggatccgaagccagggtctccaagcccgcg
ttggctactaagctgctgtccctgagcggcgtgttcgcggtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaagcagactttgaagattgggcatggagggacccta
gacagcgcagcccgaggcgtcctggtggttggaatcggaaagggaacaaaaatgttgacc
aatatgttgtcagggtccaagaggtatattgccatcggcgaactggggaaagctactgac
acactggattctacagggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaattcactgggaatataatgcaagtacctcccctctat
tctgcattaaagaaagatggacagagactttcaactttgatgaagagaggggaagcagta
gaagcaaagcctgccaggccagttactgtatacagtctctcccttcagaagttccagccg
ccatttttcacgttagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaacgtgctggagctgacccgaaccaagcag
gggccatttacactagaagagcacgcccttcctgaggacaagtggacgattgatgacatt
gctcagtctcttgagcattgctcatctctcctcccaggagagctggcacttaaaaaatcc
aaacctgaggagtctaatgaacaaatgttgagctgtgagtatataagcctcaatgagaca
aagggagaagatgatgtaattaagacattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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