KEGG   Clostridioides difficile R20291: CDR20291_0376
Entry
CDR20291_0376     CDS       T00998                                 
Name
(GenBank) pseudouridine synthase
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
cdl  Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cdl03009]
    CDR20291_0376
Enzymes [BR:cdl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     CDR20291_0376
Ribosome biogenesis [BR:cdl03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CDR20291_0376
SSDB
Motif
Pfam: PseudoU_synth_2 S4 PGI Casein_kappa
Other DBs
NCBI-ProteinID: CBE02116
UniProt: A0A9R0CDD3
Position
join(450463..450666,452497..453069)
AA seq 258 aa
MAKKQRIDKILSNLGYGSRSEIKKYCKQGSVVVNGSEVSNPGTQVDTENDEILFNGEEVI
YREYIYLIMQNSVKQEPCDFSHGRFRMNKPDGYISATTDKYDPTVLDLIDLSYLAFEPFP
VGRLDKDTEGLLVLTNDGKLSHRVLSPKKHVPKTYYAKIDGVVTEEDVEAFLEGVVLDDG
YKTMPSQLNILKSDDESEIELTIHEGKFHQVKRMFESVGKKVVYLKRLSMGNLKLDESLE
LGEYRELTDEEVKLIEER
NT seq 777 nt   +upstreamnt  +downstreamnt
atggctaaaaagcaacgtatagataaaattctttcaaatttaggttatggaagtagaagt
gaaataaagaagtattgtaaacaagggtctgtagtagtaaatggaagtgaagtttcaaat
ccaggaactcaagtagacactgaaaatgatgagatattatttaatggagaagaagttata
tatagagaatatatatatttgattatgcaaaattctgtgaagcaggaaccctgtgacttt
agtcatgggaggttcaggatgaataaacctgatggatatatatcagcaactacagataaa
tatgacccaacagtattagatttaattgatttatcatacttagcttttgaaccatttcct
gttggaaggttagataaagacacagagggattattagttttaactaatgatggaaagctt
tctcatagagttttatctcctaagaagcatgtgcctaagacttattatgcaaaaattgat
ggagtagttactgaagaagatgtagaagcttttttagaaggtgtagtgcttgatgacgga
tataaaactatgccatcacagttaaatatattaaaaagtgatgatgaatcagaaatagag
cttacaatacatgaaggtaagtttcaccaagtaaaaagaatgtttgaaagcgtaggcaaa
aaagtagtatacttaaaaagattgtctatgggcaatttaaaattggatgaaagtttagag
ttaggtgagtatagagagttaacagatgaagaagtaaaattgattgaagaaagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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