KEGG   Clostridioides difficile R20291: CDR20291_0873
Entry
CDR20291_0873     CDS       T00998                                 
Name
(GenBank) putative ABC transporter, permease/ATP-binding protein
  KO
K18887  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdl  Clostridioides difficile R20291
Pathway
cdl02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    CDR20291_0873
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cdl02000]
    CDR20291_0873
Transporters [BR:cdl02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    CDR20291_0873
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_15 FtsK_SpoIIIE nSTAND3 DUF87 Zeta_toxin AAA_21
Other DBs
NCBI-ProteinID: CBE02988
UniProt: A0A9R0BJ07
Position
1064838..1066565
AA seq 575 aa
MKKLIHFLKPYRVLIVVVLIFTFLQTLGTLYIPTLTANIVNNGVVKGDIDYIVKTGLIMM
IVAGITALSAVLVCKVSANLSSGFCRDIREAVFVKSQDLSINDFNNIGTASMITRSTSDI
TLIGQSVFMFIQLVLPAPIITVSGLFLAYSIDKAMTIIIVVVMFLFMLSAFLVGKKLIKL
FKMMQIKMDNMNRVLREVVTGVRVIRAFNREHFEKKRFDRTAIDYSETAISINKVFAVLM
PIVMLIMNLGIVSIIWFGGMRVSNGNMEIGHIMALIEYCILILFYLIMGVMVFMYIPRAG
ACADRVNQILDIEPEIVDGNGRKDTVSERGHLVFKNVTFSYAQSEEPVLNNITFEAKSGE
VTAIIGSTGSGKSTIANIIPRFFEIQSGEISINGQDVKKIPQKELRDKIGFVPQKAFLFS
GTIEENIRYGKEDASIEEIKHAASIAQADEFISDMEDKYDSFVAQGGNNLSGGQKQRISI
ARALVRKPEVYVFDDSFSALDFKTDKRLRKALKNEIKDSSAIIIAQRISTIMDANQIIVL
NDGKIVGIGKHKDLLENCEVYKQIADSQLSKEELA
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgaaaaaattaattcattttttaaaaccatatagagttttaattgttgtagttttgata
tttacgtttttacaaacacttggaactttgtatataccaacacttacagcaaatatagta
aacaatggtgtagtaaagggagatatagattatattgtaaaaacaggtttaataatgatg
atagtagctggtataacagctttatcagctgtgttagtttgtaaagtatcagcaaatctt
tcatctggattttgtagagatattagagaagcagtatttgtaaaatcacaagatttatca
ataaatgattttaataatataggtacagcatcaatgattactaggagtactagtgatatt
actttaataggtcagtctgtgtttatgtttattcaattggtattaccagcaccaattata
actgtttctggtctattcttagcatattctatagataaagcaatgacaattattattgtt
gtagtaatgtttttattcatgctttcagcatttttagttggtaaaaagcttataaagttg
tttaaaatgatgcaaataaagatggacaatatgaatagggtattacgtgaggtagtaact
ggagtaagagttataagagcttttaatagggagcattttgaaaaaaagagatttgataga
actgcaatagattattctgaaacagcaatttcaataaataaagtatttgcagtacttatg
cctattgtaatgttaataatgaatttaggtatagtaagtattatttggtttggtgggatg
agagtcagtaatggaaatatggagataggtcatataatggcacttattgaatattgtatc
ttaattttattctatttaatcatgggagtaatggtatttatgtacatacctagagcaggt
gcatgtgcagatagagtaaatcagatattagatatagaacctgaaattgtagatggaaat
ggtcgtaaagatactgtctcagagaggggacatttagtatttaaaaatgtaacattttca
tatgcacaatcagaagaacctgtgttaaataatataacatttgaagcaaaatctggagaa
gtaactgcaattataggaagcactggctcaggcaaatctactattgcaaatataatacca
cgtttttttgaaattcaatctggagaaatatctataaatggtcaggatgttaagaagatt
cctcaaaaagaacttagagataagattggatttgtgccacaaaaagcttttttatttagt
ggaacaatagaagaaaatataaggtatggaaaagaagatgcaagtattgaagaaataaag
catgctgcaagtatagctcaagctgatgaatttatttctgatatggaagacaagtatgac
tcatttgtagcacaaggtggaaataatttgtcaggtggtcaaaaacagagaatatccatt
gcaagagcgttagttagaaagcctgaagtatatgtctttgatgatagtttttctgcatta
gattttaaaacagataaaagacttagaaaagcgttgaaaaatgaaatcaaagattcatca
gctataattatagcacaacgtataagtacaatcatggatgctaatcagattatagtttta
aatgatggaaaaattgtaggtattggaaaacataaagatttacttgaaaattgtgaagtt
tataagcaaattgcggattcacaacttagtaaagaagaacttgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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