KEGG   Clostridioides difficile R20291: CDR20291_3288
Entry
CDR20291_3288     CDS       T00998                                 
Name
(GenBank) putative uncharacterized protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
cdl  Clostridioides difficile R20291
Brite
KEGG Orthology (KO) [BR:cdl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdl03021]
    CDR20291_3288
Transcription machinery [BR:cdl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CDR20291_3288
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 GerE Phage_antitermQ HTH_AsnC-type UPF0122
Other DBs
NCBI-ProteinID: CBE07258
UniProt: A0A9R0CG17
Position
complement(3926007..3926549)
AA seq 180 aa
MLIYLAILELEEDKIKFEKVYEKYRQIMFYVANKILKDDHLSEDAVHNAFLRIIKNIDKI
DEVDSPRTKAFIVIIVERIAIDFYRKRKREKVSDIEEEYKNREINFSIEDKVCESNLAIA
LAKLNESYFQVLSLKFQYGFSNKEIANALNLGEENVYKRIQRARKKLKEILEEMEVGNIE
NT seq 543 nt   +upstreamnt  +downstreamnt
atgttaatttatctagctatacttgaactcgaagaagataaaataaagtttgaaaaggta
tatgaaaagtatagacaaataatgttttatgtagccaataaaatattaaaggatgatcat
ttatcagaagatgcagtacataatgcttttttaagaataattaaaaatatagataaaatt
gatgaggtagacagtccaagaacgaaggcttttatcgttataatagtagaaaggattgct
atagacttttacagaaagagaaaaagagaaaaggtatctgatattgaagaagagtataaa
aacagggagataaatttttctatagaagataaagtatgtgaaagtaatttagctatagca
cttgcaaaacttaatgaaagttactttcaagtgctttccttaaagttccagtatggtttt
tcaaataaagaaatagcaaatgcattaaatttaggggaggaaaatgtatataagagaatt
cagcgtgctagaaaaaaattaaaagaaatattagaagaaatggaggttggaaatattgag
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system