KEGG   Castellaniella defragrans: BN940_01941
Entry
BN940_01941       CDS       T03058                                 
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
  KO
K06147  ATP-binding cassette, subfamily B, bacterial
Organism
cdn  Castellaniella defragrans
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cdn02000]
    BN940_01941
Transporters [BR:cdn02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    BN940_01941
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 RsgA_GTPase AAA_29 Zeta_toxin AAA_33 AAA_22 MMR_HSR1 ABC_ATPase Tmem26 MeaB AAA_21 NB-ARC
Other DBs
NCBI-ProteinID: CDM22864
UniProt: W8WTK3
Position
complement(424534..426783)
AA seq 749 aa
MQGLASDSTPADPCPPGLPEPWRAALAAQLAAGERVLGWLRTDLDAQLRYGDGLVVLTDR
RWLGCGTDAQDSRSWPLRPDLEARLQDHAGVGTLELVDAHARLSRWRYTLARQPEAQRLA
AAWQALREPARSGAPADAPAAEPAPTAPRASSLFRLWRFARPYGRQLAAGLALTLAATAA
SLVPPYLTMPLMDDVLIPFQNGVPIDYPLVALYLGGLLASSILAWGLGWARSAILAWVSE
RIGADLRTATYQHLQQLSLQYFGGKRTGDLIARIGSESDRICLFLSLHLLDFVTDVLMIV
MTAAVLLTIDPLLALATLAPLPLILWMIHWVRDRLRHGFEKADRVWSDITNVLADTIPGI
RVVKAFAQERREVARFREANDRNLAINDRVNALWSLFTPTITLLTELGLLVVWVFGIWLV
SRGSITVGVLTAFLAYISRFYVRLDSMSRIVSTTQRAAAGAKRIFDILDHVSSVPEPAVP
HRAEHVAGRIELSHVSFRYGSRTVIHDLSLDIAPGEMVGLVGHSGSGKSTLVNLICRFYD
VSGGAIRLDGTDIRRYAIADYRRRIGLVLQEPFLFYGTVAENIAYGRPDASRAEIVAAAR
AAHAHEFILRLPHGYDALVGERGQALSGGERQRISIARALLIDPPILILDEATSSVDTTT
ENEIQKALDNLVRGRTTISIAHRLSTLRQADRLVVMDRGRIVEIGRHEELLARDGAYARL
HRAQQQGQSPAEPGWEEADDATEEALDAS
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgcagggccttgcctccgattccacgccggccgatccgtgcccgccgggcctgcccgag
ccgtggcgcgccgccctggccgcccagctcgccgccggcgagcgcgtcctgggctggctg
cgcaccgacctggacgcccagctgcgctacggcgacgggctggtcgtcctcaccgaccgc
cgctggctcggctgcgggacggacgcccaggacagccggtcctggccgctgcgccccgac
ctggaggcgcggctgcaggaccacgccggggtgggcaccctggaactggtggacgcccat
gcccggctgtcgcgctggcgctacacgctggcgcgccaacccgaagcccagcgcctggcg
gccgcctggcaggccctgcgcgagccggcgcgctcgggcgcgcccgccgacgcgcccgcc
gccgaaccggcgccgaccgccccgcgcgccagttccctgttccgcctgtggcgcttcgcc
cgcccctacggccggcagctcgccgccggtctggccctcaccctggcggccacggcggcc
tcgctggtcccgccctacctcaccatgccgctgatggacgacgtgctgatcccgttccag
aacggcgtgccgatcgactatcccctggtggcgctctatctgggcggcctgctggcgtcc
tcgatcctcgcctgggggctgggctgggcgcgcagcgccatcctcgcctgggtcagcgag
cgcatcggcgccgacctgcgcaccgccacctaccagcacctgcagcagctgtcgctgcag
tacttcggcggcaagcgcaccggcgacctgatcgcgcgcatcggctcggaatccgaccgc
atctgcctgttcctgtcgctgcacctgctggacttcgtcaccgacgtgctgatgatcgtg
atgacggcggccgtgctgctgacgatcgatccgctgctggcgctggcgaccctggcgccg
ctgccgctgatcctctggatgatccactgggtgcgcgaccgcctgcgccacggcttcgag
aaggccgaccgcgtctggtcggacatcaccaacgtgctggccgacaccatccccggcatc
cgcgtggtcaaggccttcgcccaggaacgccgggaagtcgcgcgcttccgcgaggccaac
gaccgcaacctggcgatcaacgaccgcgtcaacgccctctggtcgctgttcacgcccacc
atcacgctgctgaccgaactgggcctgctggtggtgtgggtcttcggcatctggctggtg
tcgcgcggctcgatcaccgtcggcgtgctgaccgcgttcctggcctacatcagccgcttc
tacgtgcgcctggactccatgagccgcatcgtctcgaccacccagcgggccgcggcgggc
gccaagcgcatcttcgacatcctcgaccacgtctccagcgtgccggagcccgccgtgccc
caccgcgccgagcacgtcgccggccgcatcgagctcagccacgtcagcttccgctacggc
agccgcacggtgatccacgacctgagcctggacatcgccccgggcgagatggtcggcctg
gtgggccacagcggctcgggcaagagcaccctggtcaacctgatctgccgcttctacgac
gtgtccggcggggcgatccgcctggacggcacggacatccgccgctacgccatcgccgac
taccgccgccgcatcggcctggtgctgcaggagcccttcctgttctacggcacggtggcg
gaaaacatcgcctacgggcgcccggacgccagccgcgcggagatcgtcgccgccgcccgc
gccgcccacgcccacgaattcatcctgcgcctgccgcacggctacgacgccctggtcggc
gaacgcggccaggccctgtccggcggggaacgccagcgcatctccatcgcccgcgcgctg
ctgatcgacccgcccatcctgatcctggacgaggccacctcgtcggtggacaccaccacg
gaaaacgagatccagaaggcgctggacaacctggtgcgcggccgcacgacgatctccatc
gcccaccgcctgagcacgctgcgccaggccgaccgcctggtggtcatggaccgcgggcgg
atcgtggagatcggccgccacgaggaactgctggcgcgcgacggcgcctacgcccggctc
caccgcgcccagcagcagggccagtcccccgccgagcccggctgggaagaagccgacgac
gccaccgaggaggccctggatgcgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (42)   

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