KEGG   Castellaniella defragrans: BN940_16701
Entry
BN940_16701       CDS       T03058                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
cdn  Castellaniella defragrans
Pathway
cdn00470  D-Amino acid metabolism
cdn00550  Peptidoglycan biosynthesis
cdn01100  Metabolic pathways
cdn01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:cdn00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN940_16701
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BN940_16701
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BN940_16701
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cdn01011]
    BN940_16701
Enzymes [BR:cdn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BN940_16701
Peptidoglycan biosynthesis and degradation proteins [BR:cdn01011]
 Precursor biosynthesis
  Amino acid ligase
   BN940_16701
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATPgrasp_ST ATP-grasp CPSase_L_D2 TTL RimK ATPgrasp_YheCD ATP-grasp_4
Other DBs
NCBI-ProteinID: CDM25778
UniProt: W8X125
Position
complement(3625020..3625961)
AA seq 313 aa
MSQAFGRVGVLYGGSSAEREVSLMSGAGVCAALREEGVDAHLFDTGERSLAELAAAGFDR
VFIALHGRYGEDGTLQGALELLRIPYTGSGPLASCLAMDKIATKRLWLQHGLPTPRFAEL
ACDADPSGLADTLGLPLIVKPPHEGSTLGLTRVETAEQLREAQALACRFDDLALAEQFIR
GRELTVPVLGSGADARALPIIEIIAPQGNYDYEHKYVSNDTRYECPARLPDALTRHIQDL
AVRAYRALGCEGWGRADVMLDGQDRPWLLEMNTSPGMTSHSLVPMGARAAGMSYGCLCVE
ILSTARCKLRPAG
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagccaggcattcggccgcgtgggcgtgctgtacggcggcagttcggccgagcgggaa
gtctcgctgatgtcgggcgccggcgtctgcgccgcgctgcgcgaggaaggcgtcgacgcc
catctgttcgacaccggcgagcgcagcctggcggagctggcggcggcgggcttcgatcgc
gtcttcatcgccctgcacggccgctatggcgaggacggcacgctgcagggcgcgctggag
ctgctgcgcatcccctataccggcagcggcccgctggcctcctgcctggcgatggacaag
atcgccaccaagcggctgtggctgcagcacgggctgcccacgccgcgcttcgccgagctc
gcctgcgacgccgatccctccgggctggccgataccctgggcctgccgctgatcgtcaag
ccgccgcacgagggctcgacgctgggcctgacccgcgtcgagacggcggagcagctgcgc
gaggcgcaggcgctggcctgccgcttcgacgacctggcgctggccgagcagttcatccgc
ggacgcgagctgaccgtgccggtcctgggctcgggggcggacgcgcgggcgctgccgatc
atcgaaatcatcgcgccccagggcaattacgactacgagcacaagtacgtgtccaacgac
acccgctacgaatgcccggcccgcctgcccgacgcgctgacgcggcacatccaggacctg
gccgtgcgcgcctaccgggcgctgggctgcgaaggctggggccgggccgacgtgatgctc
gacgggcaggaccggccctggctgctcgaaatgaacacctcgccgggcatgacgagccat
tcgctcgtgcccatgggcgcgcgcgccgccggcatgagctacggctgcctgtgcgtggaa
atcctgtccacggcgcgctgcaagctgcgcccggcgggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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