KEGG   Chelatococcus daeguensis: BOQ54_13780
Entry
BOQ54_13780       CDS       T04583                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cdq  Chelatococcus daeguensis
Pathway
cdq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BOQ54_13780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdq03400]
    BOQ54_13780
Enzymes [BR:cdq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BOQ54_13780
DNA repair and recombination proteins [BR:cdq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BOQ54_13780
    RecFOR pathway proteins
     BOQ54_13780
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_22 Mg_chelatase AAA_3 AAA_17 AAA_14 AAA_2 AAA_18 AAA_16 nSTAND3 ResIII Rad17 RNA_helicase AAA_33 TsaE AAA_28 NTPase_1 MCM DUF815 NB-ARC NACHT IstB_IS21 ABC_tran AAA_24 AAA_7 Sigma54_activ_2 Cytidylate_kin
Other DBs
NCBI-ProteinID: APF38261
Position
complement(2924984..2926024)
AA seq 346 aa
MTSQRLVSAERRGDDPDQSLRPLALGEFIGQAQARANLSVFIEAAKTRGDALDHVLFVGP
PGLGKTTLAQIVARELGVNFRSTSGPVIAKAGDLAAQLTNLDERDVLFIDEIHRLNPAVE
EILYPAMEDYQLDLIIGEGPAARSVKIDLPKFTLVGATTRQGLLTTPLRDRFGIPIRLQF
YTVEELELIVKRGARVIGIGMSDDGANEIARRARGTPRIAGRLLRRVRDFAVVDGADTVT
RAIADKALQLLEVDGAGLDLMDRRYLSTIALSFGGGPVGIETIAAALSEPRDAIEEIIEP
FLIQKGFVQRTPRGRILTPHAFRHLGLEEPQRETVQFGLFGGDDEA
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgacgtctcagcgcctggtctccgccgaacggcggggcgacgaccccgatcagtcgctg
agaccactcgcgctcggcgagttcatcggccaggcgcaggcgcgggccaatctctcggtc
ttcatcgaggcggcgaagacgcggggcgatgcgctcgaccacgtgctcttcgtcggcccg
cccggcctcggcaagacgacgctcgcgcagatcgtggcccgcgagctcggcgtcaacttc
cgctccacgtccgggccggtcatcgccaaggcgggggaccttgccgcccagctcaccaat
ctcgacgagcgcgacgtgctcttcatcgacgagatccaccgcctcaacccggccgtggaa
gaaattctctatccggcgatggaggactaccagctcgacctcatcatcggcgaggggccg
gcggcgcgctcggtcaagatcgacctgccgaagttcacgctcgtcggcgcgaccacgcgc
cagggcctgctcaccaccccgctgcgcgaccgttttggcatccccatccgtctgcagttc
tatacggtggaggagctcgagctcatcgtgaagcggggcgcgcgggtcatcggcatcggc
atgagcgacgacggcgccaacgagatcgctcgccgggcccgcggcacgccgcgcatcgcc
gggcgcctcctgcgccgggtgcgcgatttcgcggtggtcgacggggccgacacggtcacc
cgcgccatcgccgacaaggcgctgcaactgctcgaggtcgacggcgccgggctcgacctg
atggaccggcgctatctctcgaccatcgcgctctccttcggcggcgggccggtgggcatc
gagacgatcgccgcagccttgtcggagccgcgcgacgccatcgaggagatcatcgagccc
ttcctcatccagaagggcttcgtgcagcgcacgccgcgcgggcgcatcctgaccccgcac
gccttccgccacctcggcctcgaggagccgcagcgcgagacggtgcagttcggcctgttc
ggcggcgacgacgaggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (32)   
   Pfam (32)   
All databases (41)   

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