KEGG   Clostridium drakei: B9W14_23005
Entry
B9W14_23005       CDS       T05484                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
cdrk  Clostridium drakei
Pathway
cdrk03030  DNA replication
cdrk03430  Mismatch repair
cdrk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdrk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B9W14_23005
   03430 Mismatch repair
    B9W14_23005
   03440 Homologous recombination
    B9W14_23005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdrk03032]
    B9W14_23005
   03400 DNA repair and recombination proteins [BR:cdrk03400]
    B9W14_23005
Enzymes [BR:cdrk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B9W14_23005
DNA replication proteins [BR:cdrk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     B9W14_23005
DNA repair and recombination proteins [BR:cdrk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     B9W14_23005
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB tRNA_anti_2 DUF6282
Other DBs
NCBI-ProteinID: AWI07221
UniProt: A0A2U8DXL6
Position
complement(5169523..5173068)
AA seq 1181 aa
MEEKTYEWVSLHQHTGYSLLDSSAKIPELISKAKELGMKSIAITDHGVMYGCVDFYKEAK
EQGIKPIIGCEVYVAGKSMHIKQNDKANENYHLVLLVKNETGYKNLMKIVSKASVEGFYY
KPRTDHDYLKKHSEGLISLSACLGGEIQSYILKENLSKAKEIALLYKDIFKDGFYLELQY
HGMEEQEKVNEELIKMSKELDIPLVATNDVHYIKKEDYKAHDVLLCIQTGKVVDEEDRMR
YPSDEFYLKSPEEMYKIFSRVPEALENTVKIAEQCNFDYEFHKSKLPKFPLPDDVEPYEY
LKDLCYKGLIQRYKVFEKLIEIPFNIENVNELVNSNDEAKKLVERLEYELSIIKQMGYVD
YFLIVWDFINFSVKNGIMTGPGRGSAAGSIIAYTLGITKIDPIKYSLLFERFLNPERVSM
PDIDSDFCYERRGEVIDYVVRKYGENSVSQIITFGTMAARACIRDVGRAMNYPYAEVDRI
AKMIPTVLNITIDKALELNSELKEAYESEERTKALIDIAKALEGLPRHTSTHAAGVVIAS
QPLVNYVPMQKNEDNIVTQFTMGTLEELGLLKMDFLGLRTLTVLRDAVNMVKDNKGISVD
LDKIDYDDKRVYSMIGEGKTVGVFQLESAGMTSFMKELRPDSLEDIIAGISLYRPGPMAE
IPKYISNKNDPEGIEYLTPELESILGVTYGCMVYQEQVMEIVRKLAGYSMGRSDLVRRAM
SKKKHHVMEEERHNFIYGIVDEEGIEKVSGCIKNGISENAADKIFDSMMDFASYAFNKSH
AACYAIVAFQTAYMIHYYPTEYIAAMLNSVKGDNEKVAYYTRFADEIGIQVLTPNINESY
AKFTVKDDKIRFGLSAIKNVGENVIDSIVKSRESKGVFLNLVDFCNKIDASCINKRVVES
LIKAGGFDCFKVYRSKLLAVYEKVLDGVSNSRKKNIDGQMSLFTDFKKIEVNIEYPEIKE
FEKRHILAMEKEMTGLYLSGHPLEEYEKSLSLQTSAKISDIIGDEALEDGTVGQQSKLKD
RDKVIVGGIINSVTKKVTRNNDMMAFIKLEDLYGVIEIIIFPKVFQKYRSLIDEDGIVIV
KGRVSVREDEQPKILCESLEPVIKENTEKLYIQIEDESSLKNALYETKSLFLDFKGNVPV
YFCTKKERKKFRLDKELWINSDIELLSNLKKMFGDKNVKVI
NT seq 3546 nt   +upstreamnt  +downstreamnt
ttggaagagaagacatatgagtgggtaagtttgcatcaacatacaggatattctctgcta
gattcttcagctaaaattccagaacttataagtaaggctaaagagcttggaatgaagagt
atagctataacagatcatggagtaatgtatggatgtgttgatttttataaagaggctaaa
gaacaagggataaaacctataataggctgtgaagtgtatgttgcaggaaagtctatgcac
ataaagcagaatgataaagcaaatgaaaattatcatcttgtgctgcttgtaaaaaatgaa
acaggatataaaaatcttatgaaaatagtttctaaggcgtctgtagaaggattttattat
aagcctagaacggatcatgattatttaaaaaaacatagtgaaggattgatatcactaagc
gcttgtttaggaggagaaattcaatcttatattttaaaagaaaatttgagcaaagcaaaa
gaaatagctcttttatataaagatatatttaaagatggattttatcttgaacttcaatat
catggtatggaggaacaagaaaaggttaatgaggaattaataaaaatgtccaaagaattg
gatatacctttggttgctacaaatgatgtacattatataaaaaaagaagattataaggct
catgatgttttactgtgcatccagacaggaaaagttgtagatgaagaagatagaatgaga
tatccatcagatgaattctatttaaagtcaccagaagaaatgtacaagatattttctaga
gtgcctgaagctttagaaaatacagtaaaaatagctgagcagtgtaattttgattatgaa
tttcataaatctaaacttcctaaattcccattgccagatgatgtggagccttatgaatat
ttaaaggatttatgttacaaagggttgatacaaaggtataaagtatttgaaaaactcata
gaaattccatttaacatagaaaatgtaaatgaattagtaaatagtaatgatgaagctaaa
aaacttgtagaaagactagaatacgaactttctatcataaagcagatgggatatgtagat
tattttctaatagtatgggattttattaatttttctgtgaagaatgggataatgacaggt
ccaggaagaggatcagcagcaggatctataattgcatatacattgggaataactaaaata
gatccaattaaatacagcttattgtttgaaaggtttttaaatcctgaacgtgtatctatg
ccagatatagattcagatttttgctatgaaaggcgtggagaggtaatagactatgttgta
aggaaatatggagagaatagtgtatctcaaattataacctttggaactatggctgctaga
gcgtgtataagagatgtgggaagagctatgaattacccttatgctgaagtggatagaata
gctaaaatgatacctacagtactaaacataactattgataaggcactagagttaaattct
gaattgaaggaagcctatgaaagtgaagagagaacaaaggcattaatagatatagctaaa
gctttggaaggacttccaagacatacgtctactcatgcagcaggtgtagttatagcatct
cagcctttagttaactatgtgcctatgcaaaaaaatgaagataatatagtaactcaattt
accatgggaacactagaagagttgggacttctaaagatggactttttaggattaagaact
ctaacagtgcttagagatgcagtaaacatggttaaggacaataaagggataagcgtagac
ttagataaaatagattatgatgataagcgtgtatacagtatgataggagaaggtaaaact
gtaggcgtgtttcagttggaatctgcaggaatgacatctttcatgaaagaattaaggccg
gattctttggaggatatcatagcgggaatcagtctttacagaccaggtcctatggcagaa
atacctaaatatattagcaataaaaatgatcctgagggtattgagtatttaacacctgaa
ttagaatccatattgggtgtaacctatggatgtatggtatatcaagagcaggttatggag
atagttagaaagcttgctggatattctatgggtagaagtgatttagtaagacgtgctatg
tctaagaaaaaacatcatgtaatggaagaggaaagacataatttcatatatggaatagta
gatgaagaaggaatagaaaaggtttcaggatgtataaagaatggaatatctgaaaatgca
gctgataagatatttgattctatgatggattttgcaagttatgcatttaataaaagtcat
gctgcttgttatgcgatagtggcatttcaaacagcttatatgatacattattatccaact
gaatatattgccgccatgttaaatagtgtaaaaggtgataatgaaaaggttgcatattat
actagattcgcggatgaaattggaattcaagttttaactccaaatataaatgaaagttat
gctaagtttacagttaaggatgataaaataagatttggactttcggctattaaaaatgta
ggtgaaaatgtaatagatagtatagtaaaatcaagggaaagtaaaggggtatttttaaac
ttagttgatttttgtaataaaatagatgcttcatgcataaacaaaagagtagtggaaagt
cttataaaagcaggagggtttgattgttttaaggtatatagatcaaaattacttgcagtt
tatgaaaaggtattggatggagtaagtaattctagaaaaaaaaatatagatggacaaatg
agtctttttacagattttaaaaagatagaagttaatatagaatatcctgaaataaaggaa
tttgaaaaaagacacattttagccatggaaaaagaaatgacaggactttatttatcagga
catcctttagaagaatatgaaaaaagcttatcattacaaaccagtgctaaaatatcagac
ataataggtgatgaagctttagaagatggaacagttggacagcagtctaaattaaaagat
agagataaagtaattgtaggtggcattataaattcagtaacaaaaaaagtgactagaaac
aatgatatgatggcttttataaaattagaggatttgtatggagtaatagaaattataata
tttccaaaggtatttcaaaaatatagaagtttaatagatgaagatggtatagtaatagta
aagggaagagtgagtgtaagagaagatgaacagcctaaaatattatgtgaaagcttagaa
cctgtaataaaggaaaatactgaaaaattatatatacaaatagaagatgaaagtagctta
aaaaatgcgctttatgaaactaaatctttatttttagattttaaaggaaatgtacctgta
tatttttgtactaaaaaagaaagaaaaaaatttagattggataaagagctatggataaat
agtgacatagaacttttatctaatcttaaaaaaatgtttggagataaaaatgttaaagta
atttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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