KEGG T01702: CDVA01

Corynebacterium diphtheriae VA01: CDVA01_1818

Entry

CDVA01_1818       CDS       T01702

Symbol

lysS

Name

(GenBank) lysyl-tRNA synthetase

K04567

lysyl-tRNA synthetase, class II [EC:6.1.1.6]

Organism

cdv Corynebacterium diphtheriae VA01

Pathway

cdv00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:cdv00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CDVA01_1818 (lysS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cdv01007]
    CDVA01_1818 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cdv03016]
    CDVA01_1818 (lysS)
Enzymes [BR:cdv01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     CDVA01_1818 (lysS)
Amino acid related enzymes [BR:cdv01007]
Aminoacyl-tRNA synthetase
  Class II (A)
   CDVA01_1818 (lysS)
Transfer RNA biogenesis [BR:cdv03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    CDVA01_1818 (lysS)
Prokaryotic type
   Other AARSs
    CDVA01_1818 (lysS)

SSDB

Motif

Pfam:

tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d DUF3085

Other DBs

NCBI-ProteinID:

AEX84085

Position

complement(1956648..1958210)

AA seq 520 aa
MSNAKNTQDVPEQLRIRREKRQKLIDAGVEPYPVIVDRTHSITELREKFAAVPEGEKGDK
PGVTYLEPGEDSGVEVAITGRALFIRNTGKLCFAALQEGNGEYMQAMLSLAEVGEESLAS
WKADVDLGDIVSIRGTVVASKRGELSVMVNSWHMASKSLRPLPVAFADMSEDMRIRHRYT
DLIMREQARTNAMTRIKVMRALRHYLEGQDFMEVETPMLQTLHGGAAARPFVTHSNALDI
DLYLRIAPELYLKRCVVGGIERVFEVNRNFRNEGVDSSHSPEFAMLETYQAWGTYDDGAK
MIQELIQSVAMEVFGSTTVTLVDGTEYDLGGEWKTIEMYPSLNEALTRKFPGQPEVTIDS
TVDELKAIAAVIGLDVPAKGGWGHGKLVEEIWEHLCEDQLYGPIFVRDFPVETSPLTRQH
RSKPGVTEKWDLYVRGFELATGYSELVDPVIQRERFEDQARLAAGGDDEAMVLDEDFLAA
MEQGMPPTAGCGMGIDRLLMALTGLGIRETVLFPIVKPER

NT seq 1563 nt +upstreamnt +downstreamnt
gtgagtaacgctaaaaacacccaagacgtacctgagcagctccgcattcgtcgcgagaag
cgccagaagcttatcgacgccggcgtggagccgtatccagtcatcgttgaccgcacccac
tcgatcaccgagctgcgcgagaagtttgcagctgtgccagagggtgaaaagggcgacaag
ccaggcgttacctacctcgaaccaggcgaggattccggcgtagaggttgccatcaccggc
cgcgccctgtttatccgcaacaccggcaagctgtgcttcgctgctctccaagagggcaac
ggcgagtacatgcaggctatgttgtccttggctgaggttggcgaggaatccttggcatcg
tggaaggccgatgttgacctaggcgacatcgtttccatccgcggtaccgtcgtcgcttcc
aagcgtggcgagctttctgtgatggtgaactcgtggcacatggcgtcgaaatcgctacgc
ccactgcctgtggccttcgctgatatgagcgaggacatgcgtatccgccaccgttacacc
gacttgattatgcgtgaacaggctcgtaccaacgctatgactcgtattaaggtcatgcgc
gcgctacgccattaccttgaaggccaggacttcatggaagttgaaacccccatgctgcaa
accctgcacggcggcgcagcggcacgtccgtttgttacgcactccaacgcccttgatatc
gacctctacctgcgtatcgcgccagaactttacctcaagcgctgcgtggttggtggtatc
gagcgtgtattcgaggttaaccgcaacttccgcaacgagggcgtggactcctcgcactcc
ccagagttcgccatgctggaaacctaccaagcgtggggcacctacgatgacggcgcgaag
atgatccaagagctcatccagtccgtcgcaatggaagtctttggctccaccaccgtcacg
cttgtcgacggcaccgagtacgacctcggcggtgaatggaagaccatcgagatgtaccca
tcgctcaacgaggcgttgacacgcaagttcccaggccagccagaggtcaccatcgactcc
actgtggacgaactcaaagcaatcgccgctgttatcggtttggatgttccagccaagggc
ggttggggccacggcaagctggtcgaagagatctgggagcacctgtgcgaagaccagctc
tacggcccaatcttcgttcgtgacttcccagtggaaacctcgccgctgactcgccagcac
cgctccaaaccgggtgttaccgagaagtgggacctctacgtgcgcggtttcgagctagca
accggttactccgagcttgtcgaccccgtcatccagcgcgagcgcttcgaggaccaagct
cgtcttgccgccggtggcgacgatgaggccatggtcttggacgaggacttcctcgcagct
atggagcagggcatgccaccaacggcaggctgcggtatgggcattgaccgcctcctgatg
gccctgaccggccttggcatccgcgagacggtactgttcccaatcgtgaagcctgagcgc
taa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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