KEGG T04068: CDES

Corynebacterium deserti: CDES_00065

Entry

CDES_00065        CDS       T04068

Symbol

gyrA

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

cdx Corynebacterium deserti

Brite

KEGG Orthology (KO) [BR:cdx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cdx03032]
    CDES_00065 (gyrA)
   03400 DNA repair and recombination proteins [BR:cdx03400]
    CDES_00065 (gyrA)
Enzymes [BR:cdx01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CDES_00065 (gyrA)
DNA replication proteins [BR:cdx03032]
Prokaryotic type
  DNA Topoisomerases
   CDES_00065 (gyrA)
DNA repair and recombination proteins [BR:cdx03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CDES_00065 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C TPD52

Other DBs

NCBI-ProteinID:

ALC04506

UniProt:

A0A0M5INQ3

Position

11851..14457

AA seq 868 aa
MSDENTGQYDRVNPIDINEEMQSSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDNG
YRPDRSYVKSAKPVADTMGNFHPHGDSAIYDTLVRMAQPWSMRYPLVDGQGNFGSRGNDG
PAAMRYTECRMTPLAMEMVRDIRENTVDFSPNYDGKTLEPDVLPSRVPNLLMNGSGGIAV
GMATNIPPHNLNELADAIFWLLENPDAEESEALEACMKFVKGPDFPTAGLIIGDKGIHDA
YTTGRGSIRMRGVTSIEEDGNRTVIVITELPYQVNPDNLVSNIAEQVRDGKLVGISKIDD
ESSDRVGMRIVVTLKRDAVARVVLNNLFKHSQLQTNFGANMLSIVDGVPRTLRLDQMLRY
YVAHQIEVIVRRTQFRLDKAEERAHILRGLVKALDMLDEVIALIRRSPTPEEARTGLMSL
LDVDEVQADAILAMQLRRLAALERQKIVDELAEIEIEIADLKDILASPERQRSIVHDELK
EIVDKYGDERRSQIIAATGDVSEEDLIARENVVITITSTGYAKRTKVDAYKSQKRGGKGV
RGAELKQDDIVRHFFVSSTHDWILFFTNYGRVYRLKAYELPEASRTARGQHVANLLEFQP
GEQIAQVIQIESYEDAPYLVLATAHGRVKKSRLLDYESARSGGLIAINLNEDDRLIGAAL
CGEEDDLLLVSEFGQSIRFTADDEQLRPMGRATAGVKGMRFRDNDQLLSMCVVRDGEFLL
VATSGGYGKRTPLEDYSTQGRGGLGVVTFKYTPKRGRLIGAIAVTEDDEIFAITSAGGVI
RTEVNQIRPSSRATMGVRLVNLEEGVELLAIDKNVEDEGEETAEAVAKGAVEGPASKSAA
RASVIVEESDTDLDSDVEEADSDAENEE

NT seq 2607 nt +upstreamnt +downstreamnt
gtgagcgacgagaataccggacaatatgaccgcgttaatcccattgatatcaatgaggaa
atgcagtcgagctatatcgactacgcgatgtcagtcatcgtcggccgcgccctccccgag
gttcgcgacggcctaaagcccgtccaccgccgcgttttgtacgcgatgtttgacaacggc
taccgccccgaccgcagctacgtgaagtctgcaaaaccagtggcagacaccatgggtaac
ttccacccacacggtgactccgcaatttatgacacgctggttcgcatggctcagccatgg
tccatgcgttacccactcgtggatggccagggtaacttcggttcccgcggcaacgacggc
cctgcggcaatgcgttataccgagtgtcgcatgaccccgctggccatggaaatggtccgc
gacatccgcgaaaatactgttgatttctccccgaactacgacggtaaaaccctcgaacca
gacgtgttgccatcccgtgttcccaacctgttgatgaacggttcgggcggtatcgcggtc
ggtatggccacgaacattccaccgcacaacttgaacgagcttgccgacgccattttttgg
cttctggaaaacccagatgccgaagaatccgaagcgctggaagcctgcatgaagttcgtt
aagggaccagacttcccaaccgctggtctcatcattggtgataagggcatccacgacgcc
tacaccaccggtcgcggctccatccgtatgcgcggtgtgacctccattgaagaagacggc
aaccgtaccgtcatcgtcatcaccgagctgccgtaccaggtcaaccctgacaacctggtc
tctaacattgctgagcaggtgcgcgacggcaagctggtgggtatctccaagatcgacgat
gagtcatccgaccgcgtcggtatgcgcatcgtcgtcaccttgaagcgtgacgccgttgcc
cgcgtggtgctgaacaacctgttcaagcactcccagctgcagaccaacttcggcgccaac
atgttgtctatcgttgatggcgtgccacgcaccctccgcctagatcagatgctgcgctac
tacgtggctcaccagatcgaggtcattgttcgccgcacccagttccgcctggacaaggcc
gaggaacgcgcccacattctgcgcggtctggtaaaggcactggacatgctcgacgaggtc
atcgccctgatccgtcgcagcccaaccccagaagaagcccgcactggtttgatgtctctc
ctggatgttgatgaagttcaggcggacgccatccttgctatgcagctgcgtcgactggca
gcacttgagcgccagaaaatcgtcgacgagctcgccgaaattgaaatcgagatcgctgac
ctcaaggacattctggccagcccagaacgccagcgctccatcgtccacgatgaactcaag
gaaatcgtggacaaatacggcgatgagcgtcgctcccagatcatcgccgctaccggtgac
gtttctgaagaagacctcatcgcccgcgaaaacgttgtcatcacgattacctccaccggc
tacgcaaagcgcaccaaggtggatgcctacaagtcgcaaaagcgcggtggcaagggtgtt
cgcggtgccgagctcaagcaagatgacattgtccgtcacttctttgtcagctccacccac
gactggatcctcttcttcaccaactacggccgtgtctaccgcctcaaggcatacgaattg
cctgaagcatcccgcactgcgcgtggccagcacgtggctaaccttctggaattccagcct
ggtgagcaaatcgcacaggtcatccagattgaaagctacgaggacgccccttacttggtg
ctcgccaccgctcatggtcgtgtgaagaagtcccgcctgctcgattatgaatcagcacgt
tccggtggcctcatcgctatcaacctgaacgaagacgatcgcctcatcggcgctgcccta
tgcggcgaagaggacgatctgctgttggtttctgaattcggtcaatccatccgcttcacc
gccgacgatgagcagcttcgccccatgggtcgtgcaaccgccggtgtgaagggaatgcgc
ttccgcgacaacgaccaactgctatccatgtgtgtggtccgcgacggcgaattcctcctc
gtagctacctccggtggctacggcaagcgcaccccacttgaggattactccacccagggc
cgtggtggtctgggagttgtcaccttcaagtacaccccgaagcgtggacgcctcatcggt
gccatcgcggtgactgaagacgatgaaatcttcgccatcacctccgccggtggcgtcatc
cgcaccgaggtcaaccagatccgcccatcttcccgcgcgaccatgggcgttcgcctggtc
aacctggaagaaggcgtggaactcttggcaatcgacaagaacgtggaagacgaaggcgaa
gagaccgctgaggcagtagcaaagggcgcagtcgaaggacctgcatccaagtccgctgca
cgcgcatcggtaattgtggaagaatctgacactgatctagacagtgacgttgaagaagca
gactccgacgccgaaaacgaggagtaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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