KEGG   Clostridium diolis: F3K33_21750
Entry
F3K33_21750       CDS       T06237                                 
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
cdy  Clostridium diolis
Pathway
cdy02020  Two-component system
cdy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cdy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F3K33_21750
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    F3K33_21750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdy03021]
    F3K33_21750
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:cdy02035]
    F3K33_21750
Transcription machinery [BR:cdy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     F3K33_21750
Bacterial motility proteins [BR:cdy02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    F3K33_21750
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF UPF0122 HTH_3
Other DBs
NCBI-ProteinID: QES75278
UniProt: A0A5P2F1D9
Position
complement(4849146..4849874)
AA seq 242 aa
MHALKDVDGKEQIIQEYIPLVKYIASRVMFGKNKYMEYEDLVSYGMVGLMDALNKFDNTK
GMKFSSYASIRIKGAMIDELRKNRPISKGAMDKLNRYNKAIDTLQLELLREPTNDEIAKY
LGISISEVGEIENYINYISMVSLENVIFSDDEDVNLIGIIEDKNSPSPDAHLQDKEQLEI
LTKAIDLLKEKDRIVLNLYYYEGLTLKEIGTVLSVSESRVCQLHSRAISSLRECMRKLHY
ID
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcacgcattaaaagacgttgatggaaaagagcagatcatacaagaatatatcccgtta
gtaaagtatattgcctcgagggttatgtttggaaagaacaaatacatggaatatgaggac
ttagttagttatggtatggttgggcttatggatgcgttaaataagtttgacaatacgaaa
ggaatgaaattttcatcatatgcgtctataagaataaaaggtgctatgatagatgagctg
aggaaaaatagacctatatctaaaggggcaatggacaaactaaatagatacaataaagcg
atagacacattgcagttagaactattaagggaacctactaatgatgagattgcaaaatat
cttgggatatctataagtgaagtaggagaaattgaaaattacataaattatatttcaatg
gtatcactggaaaatgtaattttttcggatgatgaggatgtaaaccttattggaattata
gaagataaaaatagtccaagtcctgatgctcacttacaagataaggagcaactagagatt
ttaacaaaggcaattgatctccttaaagaaaaagatagaatagtattaaatctttattat
tatgagggattaactttaaaagagataggaacagtattaagcgtttccgaatctagagtt
tgccaattacatagtagagctattagtagcttgagagagtgcatgagaaaattgcattat
attgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system