KEGG   Clostridium diolis: F3K33_22100
Entry
F3K33_22100       CDS       T06237                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cdy  Clostridium diolis
Pathway
cdy03410  Base excision repair
cdy03430  Mismatch repair
cdy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    F3K33_22100 (recJ)
   03430 Mismatch repair
    F3K33_22100 (recJ)
   03440 Homologous recombination
    F3K33_22100 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdy03400]
    F3K33_22100 (recJ)
DNA repair and recombination proteins [BR:cdy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     F3K33_22100 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     F3K33_22100 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      F3K33_22100 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 ADH_zinc_N
Other DBs
NCBI-ProteinID: QES75347
UniProt: A0A5P2EZ22
Position
complement(4918662..4920428)
AA seq 588 aa
MAERWFIKNIKADYKYISKKYALSELVSRLIVNRNIISDEMIRSYINPDFDKFHEAREMK
DLEKSVDILSEKIKAQNKIRIVGDYDVDGVISIYILYSALKRCNANVDYEIPDRIKDGYG
INMNIIKQAKEDGVDTILTCDNGISAIDQIKYAKELGITVIVTDHHDIQFVEKENNVREF
ISLSADAVVNPKQSECNYKFKQLCGAGVAFKLVEILYETFNIDKKECYKFIEFLAIATVC
DVVDLVDENRIFVKKGLELINSTTNLGLQELIRECELTEKTLSVYHLGFIIGPCINASGR
LDSAKRGLELLLSDDEEEAVRLAKELVKLNEDRKDMTMKGVETAVEIIEKSGMINDKVFV
IYIPDIHESLAGIIAGRIKEKYNVPTLVITKAEHGVKGSGRSIEEYNMFEELIKCKDLLE
KFGGHPMAAGFSLKEENIDEFRRRLNENTILKDEDLLRKVTIDSVLPLDAISYDVINDLE
RLEPFGKSNSKPLFAEKNINLLKATILGKNRNVLKLKLKTRMNKALDAIYFGDIEKFEEE
VSSKYGNEELQKLYNGEYNHVNLDLVFYPNVNEYNGNTTIQIVIQNYR
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggcagaaagatggtttataaaaaatataaaagctgattataaatacatatctaaaaaa
tatgcactttcagaattggttagtaggcttatagtaaacaggaatattataagcgatgaa
atgataagaagttatattaatccggattttgataaatttcatgaggccagagagatgaaa
gatttagaaaaatcagttgatatactgagtgagaaaataaaagctcagaataagatacga
attgttggagattacgatgttgatggtgtaataagtatttatattttatactcagcttta
aaaaggtgcaatgcaaatgtagattatgaaattccagatagaataaaagatggatatgga
attaatatgaatattataaagcaggcgaaagaagatggggttgataccatactaacttgc
gataatggtatatcggctatagaccaaataaaatacgcaaaagaattaggaattacagta
atagttacagatcatcatgatatacaatttgttgagaaagaaaataacgtcagagaattt
ataagtttaagtgctgatgctgtagtaaatccaaagcaaagtgaatgcaattataaattt
aaacaattgtgtggagcgggtgtagcatttaagcttgtagaaattctttatgagactttt
aatatagataaaaaagaatgctacaaattcatagaatttttggcaatagcgacagtttgc
gatgttgtagatttagttgatgagaataggatatttgttaaaaagggattagaacttatt
aacagtacaactaacttaggactacaagaattaataagagaatgcgaattaacagaaaaa
actttatcggtatatcatcttggatttattataggaccatgcataaatgcttcaggaagg
ctagattcggccaaaagaggattggaattattgctctcagatgatgaagaggaggcagta
aggctcgcaaaagaattagttaaattaaatgaagatagaaaagatatgaccatgaagggc
gtcgaaactgctgttgaaattatagagaaaagtggaatgataaatgataaagtatttgtt
atctatattcctgatatacatgaaagtttagcaggtataatagctggaagaataaaagaa
aaatataatgttccaactttggttataacaaaagcagaacatggtgtgaagggttcagga
agatcaatagaagaatacaatatgtttgaagaacttattaagtgcaaggatctgcttgaa
aagtttggtgggcaccctatggctgcaggtttttcattaaaagaagaaaatatagatgaa
tttaggcgaagattaaatgaaaatacaattttaaaagacgaggatttattgagaaaagtt
actatagactcggttttgccgcttgatgctataagctatgatgtgataaatgatttagaa
agattagagccttttggtaaatcaaactctaaaccattgtttgctgagaaaaatattaat
ttattaaaggcaacaatacttgggaagaataggaatgtgctaaaattaaaactcaagacc
aggatgaataaagctctggatgccatttattttggcgatattgaaaagtttgaagaagaa
gttagcagtaaatatggaaatgaagaattgcaaaaactctataatggagaatataatcat
gtgaaccttgatttagtattttatccaaatgttaatgaatataatggtaatactactata
caaatagtaatacaaaattataggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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