KEGG   Cellvibrio sp. PSBB023: B0D95_18115
Entry
B0D95_18115       CDS       T04725                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ceb  Cellvibrio sp. PSBB023
Pathway
ceb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ceb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    B0D95_18115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ceb03021]
    B0D95_18115
   03400 DNA repair and recombination proteins [BR:ceb03400]
    B0D95_18115
Enzymes [BR:ceb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     B0D95_18115
Transcription machinery [BR:ceb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     B0D95_18115
DNA repair and recombination proteins [BR:ceb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      B0D95_18115
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 DUF2490
Other DBs
NCBI-ProteinID: AQT61798
UniProt: A0A1U9NEC0
Position
4185932..4186918
AA seq 328 aa
MQTAVNEFLTPRHIDVSESGPTRARVVLEPLERGFGHTLGNALRRILLSSMAGCAITEVE
IEGVLHEYSAIEGVREDVIEILLNLKGVAVIMHGKDHAVLTLTKKGPGVVTAADIQLDHD
VEIKNPDHVIANITGNTELKMRLTIARGRGYQPADSRRRDDDESRAIGRLQLDASFSPVK
RLAYSVESARVEQRTDLDKLILDLETNGTIDPEEAIRRAATILQQQLAVFVDLEGEKQSA
PEQKEEAIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLRND
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcagactgcagtaaacgaatttttaactccgcgtcatatcgatgtttcagaaagtggg
ccaacccgcgcacgcgtggttttggaaccattggagcgtggcttcgggcatactttaggc
aatgcattgcgtcgtattttgctctcttctatggctggttgcgccataactgaagtggaa
atcgaaggcgtgttgcatgagtacagcgctattgaaggtgttcgtgaggatgttattgaa
atccttctgaacctcaaaggtgttgctgtaattatgcatggtaaggatcacgcagttctt
accttgaccaaaaaaggccccggcgttgtgactgctgctgatattcagttagatcatgat
gtggaaattaaaaatccagatcatgtgattgctaacattactggcaatactgaattgaaa
atgcgcttaaccatcgcacgtggtcgtggctaccagccagctgacagccgtcgtcgtgat
gatgatgaaagccgtgcaattggtcgcttgcagttagatgcctcttttagccctgttaag
cgcttggcttacagcgttgaaagcgctcgtgttgaacagcgcactgatttggataagttg
attttggatttggagaccaacggtaccattgatccggaagaagctattcgtcgcgcagca
actattctgcagcagcaacttgctgtgtttgttgatttggaaggtgagaaacaatcagct
ccagagcaaaaagaagaggctattgacccaattctgttgcgccctgttgatgacttggag
cttaccgttcgttcagcaaactgcttgaaagcggaaaatatttactacattggtgatttg
attcagcgcacagaagttgagctgttgaaaacgccaaacttgggtaaaaaatctcttacc
gaaattaaggacgttctggcttcacgcggattgtccctcggtatgcgtttggaaaactgg
ccaccagccagtttgagaaacgactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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