KEGG   Dickeya fangzhongdai ND14b: LH89_05550
Entry
LH89_05550        CDS       T03347                                 
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced00521  Streptomycin biosynthesis
ced00523  Polyketide sugar unit biosynthesis
ced00541  O-Antigen nucleotide sugar biosynthesis
ced01100  Metabolic pathways
ced01110  Biosynthesis of secondary metabolites
ced01250  Biosynthesis of nucleotide sugars
Module
ced_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:ced00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    LH89_05550
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    LH89_05550
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    LH89_05550
Enzymes [BR:ced01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     LH89_05550
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: AIR68699
Position
complement(1290233..1290769)
AA seq 178 aa
MQVHDTAIQGVKIIQPKVFGDARGFFLETFEKNRYQDMLDIDLDFVQDNHSRSAKGVLRG
LHFQTANPQGKLVRVVRGEVFDVVVDIRPDSPTYGRWEGVVLSEENKTQFWIPPGLAHGF
LVLSELADFEYKCTDYYNPAHEGCLLWNDADIAIDWPIASPLLSEKDKKGKAFKELWA
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcaagttcatgataccgccattcagggcgtcaaaatcatccagcccaaggttttcggt
gatgccagaggcttttttctggaaacgtttgagaaaaatcgttatcaggacatgctggat
atcgacctggactttgtgcaggacaaccattcccgctcggccaaaggcgtgttgcgcggg
ttacattttcagactgccaatccgcaggggaaactggtgcgagtggtgcgcggcgaggtg
ttcgacgtcgtcgtggatattcgcccggactccccgacctacggccgttgggaaggcgtc
gtgttgtcggaagaaaacaagacccagttctggatcccgcccggtctggcacacggtttt
ttggtgctgtccgaactggcggatttcgaatacaagtgcaccgattactataacccggct
cacgaaggctgcctgctatggaacgatgcggatatcgctatcgactggccgatagcctcc
cccctgttgtcggaaaaggataaaaagggcaaagcctttaaggagttatgggcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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