KEGG   Dickeya fangzhongdai ND14b: LH89_05860
Entry
LH89_05860        CDS       T03347                                 
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
  KO
K00240  succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced00020  Citrate cycle (TCA cycle)
ced00190  Oxidative phosphorylation
ced00650  Butanoate metabolism
ced01100  Metabolic pathways
ced01110  Biosynthesis of secondary metabolites
ced01120  Microbial metabolism in diverse environments
ced01200  Carbon metabolism
Module
ced_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ced_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ced_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:ced00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    LH89_05860 (sdhB)
   00650 Butanoate metabolism
    LH89_05860 (sdhB)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    LH89_05860 (sdhB)
Enzymes [BR:ced01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     LH89_05860 (sdhB)
SSDB
Motif
Pfam: Fer2_3 Fer4_8 Fer4_17 Fer4_10 Fer4_18 Fer4_7 Fer4_9 Fer4
Other DBs
NCBI-ProteinID: AIR68758
Position
complement(1360190..1360906)
AA seq 238 aa
MKVEFSVYRYNPDVDSAPRMQDYTLEAEEGRDMMLLDALILLKEQDPTLAFRRSCREGVC
GSDGLNMNGKNGLACITPVSTLRNGNSKIVIRPLPGLPVVRDLVVDMGQFYAQYEKIKPY
LLNNGKNPPAREHLQAPEQREKLDGLYECIMCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETEARLDDLNDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA
NT seq 717 nt   +upstreamnt  +downstreamnt
atgaaagttgaattttccgtttatcgttacaacccggatgtcgatagcgcgccgcgcatg
caggactatacgctggaagcggaagaaggccgtgacatgatgttgctggatgcgttgatc
ctcctgaaagaacaggatccgacgctggcgtttcgtcgctcctgtcgtgagggggtgtgt
ggttctgacggtctgaacatgaatggcaagaatgggctggcgtgcattactccggtgtcc
accctgcgtaacggcaatagcaaaattgtgatccgccccctgccggggctgccggttgtg
cgtgatttggtggtggacatgggacagttctatgcccaatatgagaaaatcaaaccttac
ctgttgaataatgggaaaaatccgccggcgcgcgaacatttgcaagcgccggaacagcgg
gaaaaactggatggactgtacgagtgcatcatgtgtgcttgctgctccacgtcctgcccg
tcgttctggtggaacccggataagtttatcgggcctgccggtctgctggccgcgtaccgt
ttcctgatcgatagccgcgatacggaaaccgaagcgcgtctggacgacctgaatgacgct
ttcagcgtattccgctgtcacagcatcatgaattgcgtcagcgtttgcccgaaaggattg
aacccaacgcgcgccatcggccatatcaagtcgatgctgttgcagcgtagcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (33)   

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