KEGG   Dickeya fangzhongdai ND14b: LH89_06065
Entry
LH89_06065        CDS       T03347                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ced03016]
    LH89_06065
Enzymes [BR:ced01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     LH89_06065
Transfer RNA biogenesis [BR:ced03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    LH89_06065
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM B12-binding TRAM_2
Other DBs
NCBI-ProteinID: AIR68793
Position
1400198..1401622
AA seq 474 aa
MTKKLHIKTWGCQMNEYDSSKIADLLESTHGYQLTEVAEEADILLLNTCSIREKAQEKVF
HQLGRWKTLKDVNPNLIIGVGGCVASQEGEHIRDRAHYVDVIFGPQTLHRLPEMINHVQG
TRSPIVDISFPEVEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDD
VLFEIAQLAAQGVREVNLLGQNVNAYRGATHDDDICSFAELLRLVATIDGIDRIRFITSH
PIEFTDDIISVYEDTPELVSFLHLPVQSGSDRVLTMMKRRHTALEYKAIIRKLRKARPAI
QISSDFIVGFPGETQEDFEQTMKLIADVDFDMSFSFIYSPRPGTPAADMVDDVTEEEKKQ
RLYILQERINQQAMQYSRRMMGTVQRILVEGTSRKSVMELSGRTENNRVVNFEGTPDMIG
KFVDVEIVDVYPNSLRGVVIRTEDQMDLRVSESPTSVIARTRKENELGVGLYQP
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgacaaagaaactgcatatcaaaacctggggctgtcagatgaatgaatacgattcatcg
aagatagccgatctcctggaaagtacgcacggttaccagctgaccgaagtcgcggaagaa
gccgacattctgctgctgaatacctgttcgatccgtgaaaaggcgcaggaaaaagtgttt
catcagctcggccgctggaaaacgctcaaagacgtcaacccgaatctgattatcggcgtg
ggcggctgcgtagcttcgcaggaaggtgaacacattcgcgaccgtgcgcattacgtggac
gtgattttcgggccgcagaccctgcatcgtctgccggaaatgattaaccatgtgcagggc
acccgcagcccaatcgtggatatcagcttcccggaagtggaaaaatttgaccgtctgccg
gaaccgcgcgccgaagggccgaccgccttcgtctccatcatggaaggctgtaacaaatac
tgtaccttctgcgtggtgccttatacccgcggcgaagaggtcagccgcccggttgacgac
gtcctgtttgaaatcgctcaactggcggctcagggcgtacgtgaagtcaacctgctgggc
cagaacgtgaatgcttaccgcggcgcgacgcacgatgacgacatctgcagttttgccgaa
ctgctgcgtctggtggcgacgattgacggtatcgaccgcatccgcttcatcaccagccac
cccatcgaattcaccgacgatatcatcagcgtgtacgaagatacgccggagctggtgagt
ttcctgcacctgccggttcagagcggctccgaccgcgtactgaccatgatgaagcgccgt
cacaccgcactggaatacaaggccatcatccgcaaactgcgcaaagcccgcccggcgatc
cagatcagttccgactttatcgtcggcttcccgggcgaaacgcaggaagatttcgagcag
accatgaaactgatcgccgatgtcgatttcgacatgagcttcagctttatctactcgcct
cgccccggcaccccggccgccgacatggtggacgacgtaaccgaagaagagaaaaaacag
cggctgtacattctgcaggaacgcatcaaccagcaggccatgcagtacagccgccggatg
atgggcacagtacaacgcattctggtcgaaggcacctcgcgcaagagcgtgatggaactg
tccggccgtactgaaaacaaccgcgtagtcaactttgaaggaacgcccgatatgatcggc
aaattcgtcgacgtggaaattgtcgacgtttacccgaactcgctgcgtggcgtggtcatc
cgcaccgaagatcaaatggatctgcgcgttagcgagtcgccgacgtcggttatcgctcgt
acccgcaaagagaacgagctaggcgttggcctctatcagccgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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