KEGG   Dickeya fangzhongdai ND14b: LH89_14910
Entry
LH89_14910        CDS       T03347                                 
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ced  Dickeya fangzhongdai ND14b
Pathway
ced00270  Cysteine and methionine metabolism
ced00450  Selenocompound metabolism
ced00670  One carbon pool by folate
ced01100  Metabolic pathways
ced01110  Biosynthesis of secondary metabolites
ced01230  Biosynthesis of amino acids
Module
ced_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:ced00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    LH89_14910 (metH)
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    LH89_14910 (metH)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LH89_14910 (metH)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    LH89_14910 (metH)
Enzymes [BR:ced01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     LH89_14910 (metH)
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding MtrH
Other DBs
NCBI-ProteinID: AIR70430
Position
3350980..3354663
AA seq 1227 aa
MANRLQALQQQLAQRIMILDGGMGTMIQSYRLQEEDYRGERFADWQCDLKGNNDLLVLSK
PEVITAIHNDYLAAGADILETNTFNATRIAMADYEMEALSAEINTVAARLARACADEWTA
RTPERPRYVAGVLGPTNRTASISPDVNDPAYRNVSFDQLVEAYRESTRALVEGGVDIILI
ETIFDTLNAKAAIFAVETEFEALGVTLPVMISGTITDASGRTLSGQTTEAFYNSLRHARP
LSFGLNCALGPDELRQYVAELSRIAECYVTAHPNAGLPNAFGEYDLDADEMARQIGEWAQ
SGFLNIIGGCCGTTPEHIAAMVKAVDGVAPRALPALPVACRLSGLEPLNIGDDTLFVNVG
ERTNVTGSAKFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLNAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWDVVEAGLKCIQGKGIVNSISMKEGVEAFVHHARLVRRYGAAV
VVMAFDEVGQADTRARKIEICRRAYQILTEEVGFPPEDIIFDPNIFAVATGIDEHNNYAV
DFIEACADIKAQLPHALISGGVSNVSFSFRGNEPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPAELRDAVEDVVLNRRDDGTERLLAIAEKYRGSKSDDDSNKGEAEWRGWPVR
KRLEYALVKGITEFIEQDTEEARAQSTRPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVK
SARVMKQAVAYLEPFIQASKEQGSSAGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPTDKILKTAREENVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRSVGVVSALLSDSQRDDFVARIRKEYETVRIQHGRKKPR
TPPVALGVARDNAMPIDWESYTPPVAHRLGVQPVSAGIETLRNYIDWTPFFMTWSLAGKY
PNILEDEVVGEEAKRLFADANAMLDTLSASGTLNPRGVVGLFPANRVGDDIEIYTDERRT
EVLTVSHHLRQQTEKTDFPNYCLADFVAPKTSGKPDYFGAFAVTGGLEEDELAAQWEAQH
DDYNKIMLKALADRLAEAFAEYLHERVRKVHWGYAPNENLGNDELIRENYQGIRPAPGYP
ACPDHTEKATIWQLLDVDNTVGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQRDQV
EDYAARKSLPIDEVERWLAPNLGYDAD
NT seq 3684 nt   +upstreamnt  +downstreamnt
atggcaaatcggttacaggcattacagcagcagctggcgcaacgcattatgattctggac
ggcggcatgggcaccatgatccagagctaccgtctgcaggaagaagattaccgcggcgaa
cgttttgccgactggcagtgcgacctgaaaggcaataacgacttgctggtgctgagtaaa
ccggaggtgatcaccgccattcataacgattatctggcggcgggcgcggatattctggaa
accaacaccttcaacgccacccgcatcgccatggccgactacgagatggaagcgctgtcg
gcggaaatcaataccgtcgccgcccggctggcgcgcgcctgcgccgatgagtggacggcg
cgtacgccggagcgcccgcgctatgtcgccggggtgctggggccgaccaaccgcaccgcg
tcgatctcgccggacgtcaatgacccggcgtaccgtaacgttagcttcgaccaactggtg
gaagcataccgcgaatcgacccgcgcgttggttgaaggcggcgttgatatcatcctgatc
gaaaccattttcgacaccctaaacgccaaagccgccatttttgcggtagaaaccgaattc
gaagcgctgggcgtcacgctgccggtgatgatctccggcaccattaccgatgcctccggc
cgtaccctgtccggccagactaccgaagcgttttataactcgctgcgccacgcccggccg
ctgtcattcggccttaactgtgcgctggggccggacgaactgcgtcagtacgtggcggaa
ctgtcgcgcatcgccgagtgctacgtgaccgcgcaccccaacgccggcttgccgaacgct
tttggcgaatacgatctggatgcggacgagatggcgcgccagattggcgagtgggcgcag
tccggcttcctgaacattatcggcggatgctgcggcaccacgcctgagcatatcgccgcg
atggttaaagccgttgacggcgtggcgccgcgcgcgttgccggcgctgccggtggcctgc
cgcctgtccgggctggagccgctgaacatcggcgacgacacgctgttcgttaacgtcggc
gaacgtaccaacgttaccggttccgctaaattcaagcgcctgatcaaagaagaaaagtac
aacgaggcgttggacgtggcgcgtcaacaggtggaaagcggcgcacagatcatcgatatc
aacatggacgagggcatgctcaacgccgaagcggcgatggtgcgtttcctcaacctgatc
gccggcgagccggatatcgcccgggtgccgatcatgatcgactcctccaagtgggacgtg
gtggaagccgggctgaagtgtattcagggcaagggcatcgtcaactcgatttcgatgaaa
gaaggcgtggaggcttttgtgcatcacgcccggctggtgcgccgttacggcgccgccgtg
gtagtgatggcgtttgatgaagtggggcaggcggatacccgcgcgcgcaagattgagatt
tgccgccgcgcctaccagatcctgaccgaagaagtcggtttcccgccggaagacatcatt
ttcgacccgaacatttttgccgtcgctaccggcattgatgagcacaacaattatgcggtg
gactttatcgaggcctgcgccgacatcaaagcccaactgccgcacgcgctgatttccggc
ggcgtgtccaacgtgtcgttctcgtttcgcggcaacgagccggtacgcgaggcgattcac
gccgtgtttctgtattacgccatccgcaacggcatggacatgggcatcgtcaacgccggt
cagctggcgatctacgatgatttacccgccgagctgcgcgacgcggtggaggacgtggtt
ctcaaccggcgcgacgacggcaccgaacggctactggcgattgccgagaaataccgcggc
agcaaatccgacgacgacagcaacaaaggcgaggccgaatggcgcggctggccggtgaga
aaacggctggagtacgcgttggtcaaaggcatcaccgagtttatcgagcaggacaccgaa
gaagcgcgggcgcagtcgactcgccctatcgaagtgatcgaggggccgctaatggacggc
atgaacgtggtcggcgacctgttcggcgccggcaaaatgttcctgccgcaggtggtgaag
tcggcgcgagtgatgaagcaggcggtggcgtatctggagccgttcattcaggccagcaaa
gagcagggttccagcgccggcaagattctgctggcgacggtgaagggcgacgtacacgac
atcggcaagaacatcgtcggcgtggtattgcagtgcaacaactatgaaattatcgatctg
ggcgtgatggtgccgaccgacaagatcctcaagaccgcgcgcgaggagaatgtcgatatc
atcggcctgtcggggctgattacgccgtcgctggatgaaatggtcaacgtcgccaaagag
atggagcgccagggctttacgctgccgttgctgatcggcggcgccaccacttccaaggcg
cacaccgcggtgaagatcgaacagaactacagcggcccgacggtctacgtgcagaatgcg
tcgcgctcggtgggcgtggtgtcggcgctgttgtcggacagccagcgcgatgactttgtg
gcgcgtatccgcaaagaatacgaaacggtgcgcatccagcacggtcgcaaaaaaccgcgc
acgccgccggtggcgctgggcgtggcgcgcgacaacgccatgccgatcgactgggaaagc
tatacgccgccggtagcgcatcgcctcggcgtgcagccggtttccgccggcattgaaacc
ttgcgtaactatatcgactggacgccgttctttatgacctggtcgctggcgggcaaatac
cccaacattcttgaagacgaggtggtgggcgaggaagccaagcgcctgtttgccgacgcc
aacgccatgctggataccctatcggccagcggcacgttgaacccgcgcggggtggtgggg
ttgttcccggccaaccgggtgggcgatgacatcgaaatctataccgacgagcgtcgtacc
gaggtgctgaccgtcagccatcatctgcgtcagcaaaccgaaaagaccgattttcccaac
tactgtctggcggattttgtcgcgccgaaaaccagtggcaagccggattatttcggcgcg
ttcgcggtgaccggcgggctggaagaggacgagctggcggctcagtgggaagcgcagcac
gacgactacaacaagatcatgctcaaagcgctggcggaccggctggcggaagcgttcgcc
gaatacctgcacgagcgggtgcgcaaggtccactggggctacgcgccgaacgagaacctc
ggcaatgacgaactgatccgcgagaactatcagggcatccgcccggcgccgggctacccg
gcctgtccggaccacaccgaaaaagcgaccatctggcaactgctggacgtggacaatacc
gtcggcatgaaactcaccgagtcctacgccatgtggccgggcgcgtcggtgtccggctgg
tacttcagccacccagacagcaagtatttcgccgtggcgcaaattcagcgtgatcaggtg
gaagattacgccgctcgtaaatcgttgccgatcgacgaggtggagcgctggctggcgccg
aatctggggtatgatgcggattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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