KEGG   Dickeya fangzhongdai ND14b: LH89_18305
Entry
LH89_18305        CDS       T03347                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ced03021]
    LH89_18305
Transcription machinery [BR:ced03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LH89_18305
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_20 HTH_28
Other DBs
NCBI-ProteinID: AIR71060
UniProt: A0A2K8QRV2
Position
4102870..4103445
AA seq 191 aa
MSEQLADQVLVERVQKGDRKAFNLLVVRYQHKVASLVSRYVPAGDVPDVVQESFIKAYRA
LESFRGESAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENYENASALKEISNPEN
LMLSEELRRIVFHTIESLPEDLRLAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDNKVQPLIQR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagcgagcagttagcggatcaggtgctggttgagcgggtccagaaaggcgacagaaag
gcgtttaacttactggtcgtccgttatcagcataaagtggcgagcctggtatcgcgttac
gttcccgccggggacgtgcccgatgtggtgcaggagtcgtttatcaaagcctatcgcgcg
ctggaatcgtttcgtggcgagagtgccttttacacctggctgtaccgtattgccgtcaac
acggcgaagaattatctggtggctcaggggcggcgtccgccgtccagcgatgtggacgcc
aacgacgcggaaaattacgaaaatgccagcgcgttgaaagaaatatcgaaccctgagaac
ttaatgttgtctgaggaattacgacggatcgttttccatactatcgagtcattgcctgag
gatttgcgtctggcaattacgctgcgtgaactggatgggctgagctatgaggaaattgcc
gccatcatggattgcccggtcggcactgtccgctcgcgtatattccgcgcacgggaagcg
attgataataaagtgcaaccgcttattcagcgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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