KEGG   Dickeya fangzhongdai ND14b: LH89_18590
Entry
LH89_18590        CDS       T03347                                 
Name
(GenBank) ribosomal RNA large subunit methyltransferase N
  KO
K06941  23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ced03009]
    LH89_18590
Enzymes [BR:ced01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     LH89_18590
Ribosome biogenesis [BR:ced03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LH89_18590
SSDB
Motif
Pfam: RlmN_N Radical_SAM Radical_SAM_2
Other DBs
NCBI-ProteinID: AIR71114
Position
4163396..4164574
AA seq 392 aa
MSEQTVSPVVAVADAIAVAANSNEKINLLDFNRQQMRAFFAELGEKPFRADQVMKWIYHY
CCDDFNQMTDINKVLRGKLQAIAEIRAPEVVDEQRSSDGTIKWAILVDGQRVETVYIPEE
DRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIIGAAKVTGQRPITN
VVMMGMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAI
SLHAPTDEIRNEIMPINKKYDIETFLSAVRRYLEKSNANQGRVTVEYVMLDHINDGTEHA
HQLAECLKDTPCKINLIPWNPFPGAPYGRSSNSRVDRFSKVLMEYGFTTIVRKTRGDDID
AACGQLAGEVVDRTKRTLKKKMQGDTIAVKTV
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtctgagcaaaccgtatctcccgtcgtcgctgtggctgacgccatcgccgttgccgct
aacagcaatgaaaaaatcaacctgctggatttcaaccgtcagcaaatgcgcgcttttttc
gccgaactgggtgaaaagccgttccgcgccgatcaggtcatgaaatggatctatcactac
tgctgtgatgattttaaccagatgaccgacattaataaggtgctgcgcggcaagctgcag
gcgattgcggaaattcgggcgcccgaggtggtggacgaacaacgctcttccgatggcacc
attaagtgggcgattctggttgacggtcagcgcgtggaaacggtgtacattccggaagaa
gatcgcgccacgctgtgcgtctcctcgcaggttggttgcgcgctggagtgcaaattctgt
tctaccgcgcagcagggcttcaaccgcaacctgcgcgtatccgaaattatcgggcaggta
tggcgcgcggcgaaaattatcggcgccgctaaagtgactggtcagcgcccgatcaccaac
gtggtgatgatggggatgggcgaaccgctgctgaacctgaccaatgtagtgccggcgatg
gaaatcatgctggatgattttggtttcggcctgtccaaacgccgcgttacgctgtcgact
tctggcgtggtgccggcgctggataagctcggcgacatgatcgacgtggcgctggcgatt
tccctgcatgcgccgaccgatgaaatccgtaacgaaatcatgccgatcaacaaaaagtat
gatatcgaaaccttcctgtccgccgtgcgtcgctatctggagaaatccaacgccaatcag
gggcgtgtgaccgtggaatacgtgatgctggatcacatcaacgacggtaccgagcatgct
caccaactggccgagtgcctgaaagacacgccgtgcaagatcaacctgattccctggaac
ccgttccccggcgcaccttacggccgcagttccaacagccgagtcgatcgtttttccaag
gtgctgatggagtacggcttcaccaccatcgtgcgtaaaacccgcggtgatgatatcgat
gccgcctgcggtcaattggcgggagaagtggtggatcgcaccaaacgtacgctgaagaaa
aagatgcaaggcgacacgattgcggtaaaaaccgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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