KEGG   Dickeya fangzhongdai ND14b: LH89_19645
Entry
LH89_19645        CDS       T03347                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ced03016]
    LH89_19645 (truA)
Enzymes [BR:ced01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LH89_19645 (truA)
Transfer RNA biogenesis [BR:ced03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LH89_19645 (truA)
 Prokaryotic type
    LH89_19645 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: AIR71314
Position
4412091..4412927
AA seq 278 aa
MTALQHADDEAPLKIALGIEYDGSRYYGWQRQAEVDSVQGCLEAALSQVANERIDVFCAG
RTDAGVHATGQVVHFTTRSVRKDAAWTMGVNANLPPDIAVRWVKTVDDAFHARFSATARR
YRYVIYNRRFRPAILSRGVTHYYLPLDAERMHRAGQCLLGENDFTSFRAVQCQSRTPWRN
LMHLRVVRQGDYVVVDIKANAFVHHMVRNIVGSLMEIGCGNQPENWMAELLAAKDRTLAA
ATAKADGLYLVSVDYPQDFGIPCASMGPLFLPDEAIYG
NT seq 837 nt   +upstreamnt  +downstreamnt
atgacggcgttgcagcacgcggatgacgaggcgccgctgaaaatcgccctggggatcgag
tatgacggcagtcgttattacggctggcaacgtcaggctgaggtggacagcgttcagggt
tgcctggaggcggcgttgtctcaggtggcgaacgagcgaatcgacgtattttgcgccggc
cgcaccgacgccggggtgcacgcgaccgggcaggtggtgcacttcaccacccggtcggtg
cgtaaggacgccgcctggactatgggcgtcaacgccaacctgccgccggatatcgcggtg
cgttgggtgaaaacggtggatgacgcgtttcatgcccgtttcagcgccaccgctcgtcgt
taccgctacgtgatttataaccggcgcttccggccggcgatcctgtcgcggggcgtgacg
cactactacctgccgctggatgccgagcgcatgcaccgcgccggtcagtgcctgctgggc
gagaacgattttacctcgttccgggcggtgcagtgtcagtcgcgcacgccctggcgtaac
ctgatgcacctgcgggtggtgcgtcagggggactatgtcgtggtggacatcaaggccaac
gcgtttgtgcatcatatggtgcgtaacattgtgggcagcctgatggaaatcgggtgcggc
aaccagccggaaaactggatggccgaactgttggcggcaaaggatcgaacgttggccgcc
gcgacggcgaaagccgatgggctgtatttggtttcggtggattatccgcaggatttcggt
attccatgtgcgtcgatgggaccgctgtttctgccggatgaggcgatttacgggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system