KEGG   Cellvibrio sp. KY-YJ-3: D0B88_11970
Entry
D0B88_11970       CDS       T06234                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
cek  Cellvibrio sp. KY-YJ-3
Brite
KEGG Orthology (KO) [BR:cek00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cek03016]
    D0B88_11970
Enzymes [BR:cek01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     D0B88_11970
Transfer RNA biogenesis [BR:cek03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    D0B88_11970
 Prokaryotic type
    D0B88_11970
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: QEY12905
UniProt: A0A5J6P380
Position
2830044..2831027
AA seq 327 aa
MTEFSLDFPRAYGELNASAIFRDQPEDFKVDEDLGFEPLGTGEHVFLQILKRGENTAWVA
GKIAELAKVNINDVGYAGRKDRHAVTTQWFSVYMPKGIEPDWILLNSDTIYVIRVARHQQ
KLRRGDHRQNYFVIRLRDLQTDSRPVLEQKIHQVLTLGVPNYFGEQRFGFNGNNLIEADA
ILVGGKRYKDKQKRGLMLSAGRSYLFNQVLAVRVVAGNWCDLVSGDPEPQSSGPLWGRGR
SLASDELLAFEQTVLADWQQWCDGLEHAGLSQERRPLRLLPANAQWRWIENDLELSFSLA
AGEFATAVLRELAQLTNRSQDSLIELE
NT seq 984 nt   +upstreamnt  +downstreamnt
ttgacagaattttcgttggatttcccgcgtgcatacggcgaactgaatgcatcggctatt
tttcgtgatcaaccggaagactttaaagtggatgaagacttgggcttcgaaccactgggg
acgggtgaacatgtttttctgcaaatattaaagcgcggtgaaaacacggcgtgggttgcc
ggaaaaattgccgagctggcaaaggttaatattaatgatgttggatatgctggccgcaag
gatcgccatgcagtgaccacccaatggtttagtgtttatatgccaaaaggtattgagccg
gattggatcttgcttaacagcgatacgatttatgtgattcgcgttgcgcgccatcagcag
aagctgcgtcgaggtgatcatcgccaaaattattttgtaattcgtttgcgcgatcttcaa
acagatagtcgtcctgtattggaacaaaaaattcatcaggtgctaaccttgggcgtgccc
aattattttggcgagcagcgttttggttttaatggtaataatttgatagaagccgatgca
attttggtgggcggtaaacgttacaaagacaaacaaaaacgcgggttaatgttatctgcc
gggcgctcctatttgtttaatcaggttctcgctgtgcgagttgttgcaggtaattggtgt
gatcttgtatcgggcgatcccgaacctcaatcatccggccccttgtgggggcgcggtcgc
tcattggcaagcgatgagttattggcgtttgaacaaacagtgttagctgattggcaacaa
tggtgtgatgggctggagcatgccggattgtcgcaagagcgacgacctttgcgtttgctt
cctgcaaatgcccagtggcgctggatagaaaacgatttggagctttccttttcgttggct
gccggtgagtttgccactgctgttttgcgtgagttagcgcagttaactaatcgctcacag
gactcacttatcgagttggagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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