KEGG   Caenorhabditis elegans (nematode): CELE_E02H1.3
Entry
CELE_E02H1.3      CDS       T00019                                 
Symbol
tag-124
Name
(RefSeq) putative tRNA pseudouridine synthase tag-124
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cel03016]
    CELE_E02H1.3 (tag-124)
Enzymes [BR:cel01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     CELE_E02H1.3 (tag-124)
Transfer RNA biogenesis [BR:cel03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CELE_E02H1.3 (tag-124)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 174509
NCBI-ProteinID: NP_496062
WormBase: WBGene00006473
Ensembl: WBGene00006473
UniProt: Q09524
Position
II:9591292..9592936
AA seq 402 aa
MGSKRVCPDANNSVKSKKAKTLDFLAHPRRKIAIQFFYLGWEHDGLVQQPHTQNTVENHI
MQALIKTHLIEDWTKCDFSRCGRTDKGVSAFKQTAAMVVRSLCPGDSGVFWSDSTQEHQK
VDYKASGEELPYVKMLNGVLPKTIRVFAWAPVAQTFNARFDCNRRTYKYSFAKADLNLEK
MRQGAELLVGEHDFSNFCQIDMNEKRLLQSYVRKVYEVKVEQVSTHPENDMYSMVELTVS
GSGFLWHMIRYIVTILQEIGRENEQPSLISQLLDLKKYPSRPQYTLASDTPLCLFDCGYK
SEDVEWKVHDYTLKSTVTGLQKTWATYQARSRMMENMLGELTGMAEFSSGDANKGLHEFV
QDRPIPSNYIRFENRKMCESLESKKEKMAEKKKNGEESSDKL
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggggtcaaaaagagtatgcccagatgcaaataattctgtaaagtcaaaaaaagcaaaa
accctggattttctcgctcatcctcgacggaagattgcaattcagtttttctatttgggc
tgggagcatgatgggcttgttcaacaaccgcatacacaaaatacggtggaaaatcatatc
atgcaggcactaataaaaactcatttaattgaggactggacgaaatgtgatttttcgcgt
tgtggacggaccgataaaggagtttccgcatttaaacaaactgctgcaatggttgttaga
tctctgtgtcccggtgactcaggagtgttttggtcagattctacgcaagagcatcaaaaa
gtggactataaagctagtggagaagagcttccctatgtaaaaatgctcaatggagttctt
ccgaaaaccatcagagtcttcgcctgggctcctgtcgcgcaaacgttcaatgccagattc
gattgtaatagaagaacatataaatattcttttgctaaagctgaccttaacttagagaaa
atgcgtcagggcgcggagctattggtcggtgagcacgatttttcgaatttctgccaaatc
gatatgaacgagaaaagactgctgcagtcttatgttagaaaagtctatgaagtcaaggta
gaacaagtatcgactcatccagaaaatgatatgtattcaatggtggagctcactgtatct
ggaagtggtttcctttggcatatgattcgatacatagtcacgatccttcaagaaattgga
agagaaaatgaacaaccatcattaatctcacagcttcttgacctgaaaaaatatccgagc
cggccgcagtacaccttagcctcggacactcctctatgcttattcgattgtggatataaa
tctgaagatgttgaatggaaagttcatgactatacactgaaaagtacagtgaccggacta
caaaaaacctgggcgacgtatcaggcgagaagtcgaatgatggaaaatatgctcggagaa
ctgactggaatggctgaattcagttcaggagatgccaataaaggacttcacgaatttgta
caagatcgtccgataccttcaaattacataaggtttgagaataggaaaatgtgtgaaagc
ctggagagcaagaaagagaaaatggcagaaaagaagaaaaatggagaagaatcttcggat
aaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system