KEGG   Caenorhabditis elegans (nematode): CELE_F10G7.4
Entry
CELE_F10G7.4      CDS       T00019                                 
Symbol
scc-1
Name
(RefSeq) Sister chromatid cohesion protein 1
  KO
K06670  cohesin complex subunit SCC1
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F10G7.4 (scc-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    CELE_F10G7.4 (scc-1)
SSDB
Motif
Pfam: Rad21_Rec8_N Rad21_Rec8 SMC_ScpA
Other DBs
NCBI-GeneID: 173808
NCBI-ProteinID: NP_494836
WormBase: WBGene00004737
Ensembl: WBGene00004737
UniProt: Q19325
Position
II:<4698721..4700994
AA seq 645 aa
MFYAQFVLAKKGPLAKVWLAAHWEKKLTKAQIFETDVPQAIEEVIRPKVKMALRTVGHLL
LGIVRIYSKKTRYLLADTNEAYQKMKINFRNGFSFEVDIPENAEIEEDFSNFIDKYNITV
PEFHDADYNEQLIMANVSRREDITMKETVNFNVEFNIDADFDGFGDEGESWQLDHLYGSV
EPLSLRPTPQPESLMEVERDRDVAANGTEISRIDADSVIFSEGPTRPNLIFDNQEGGNFM
PEMNLKVENQTLENDGGVGPADMFSSMIHPVREHAVADVQNDDGMDFDYQPFEPENVEPS
RPQSPESFALEPLDVEHMEGRKKRQRKARKLIVDAETMISNDAFREQQEDFSDTMRVVEM
APPTRKMFNLCVSGDLQHLSREPGCKMFNRELLQRYRRCLVTREFDLNYTMQELSDSSSF
TPSMEAQAEPWEDLNLNEDIQEDIQAQGPAVDEFFNDVRMDDDDDRQPAQEMDFGDNFDF
PQEVEHQECAPIPIQSGFAGENKENEDAEDWSDPFGSSNSSRRGQLEAYGFGNTSTYKED
DGKWAKRAKHILKKVSADIETSGQADFSSVTATAKNRKQAAEQFYSLLTLAKSQAISVDQ
SEPYGEIVIRPGANFKEACPLSSPKPMGLGNTMENSTMRTPMRPV
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgttctatgcacagttcgttctcgccaaaaagggaccgttggcaaaagtgtggctggca
gctcactgggaaaaaaagctgacaaaggcgcaaatcttcgaaacagatgttccccaagcg
atcgaggaagtcattcgccccaaggttaaaatggcgctccgaacagttggacatcttctc
cttggaatcgtgagaatctactcgaagaagacacgatatcttctggctgatacaaatgaa
gcgtatcaaaagatgaagattaacttccgcaacggattcagttttgaagtcgacattcca
gagaatgcagaaattgaagaggatttctcaaacttcattgataagtacaatatcacagtg
cccgagttccacgatgccgactacaatgagcagctcattatggctaatgtgagccgtcgt
gaagacatcaccatgaaagaaaccgtcaatttcaatgtcgagttcaacattgacgcagat
ttcgatgggttcggtgacgaaggagaatcttggcaactcgatcatctctacggatcggtg
gaacctttgtctttgcgccccactcctcagccagaatcgttgatggaagtcgaacgagat
cgtgatgtggctgcaaatggaacggaaatttcccgtatagatgcggatagtgtgattttc
tccgaaggaccaacacgtccaaatcttatttttgacaatcaggaaggcggaaatttcatg
cctgaaatgaacctgaaggttgagaatcaaacactggaaaacgatggtggtgttgggcct
gctgatatgttcagctcaatgattcatcccgtcagagagcatgctgtcgcagatgttcaa
aacgacgatggtatggactttgactatcaaccgttcgagcctgaaaacgttgagccatcg
agaccacaaagtcccgagtcatttgccctggagcctctagatgtggagcacatggaagga
cggaaaaaacgtcagagaaaagcgagaaagctgattgtcgatgctgaaactatgatttca
aacgacgctttccgagagcaacaagaagacttctccgatacgatgcgagtagttgaaatg
gcgcctcctaccagaaagatgttcaatttatgcgtcagcggagatcttcaacacctcagc
cgtgaacctggatgcaaaatgttcaacagagaactccttcaaagatacaggagatgtttg
gtcacccgagagttcgatctcaattacaccatgcaagagttgagcgatagttcgagtttc
actccgtcaatggaagctcaagctgagccatgggaggacttgaacctcaatgaggacatt
caagaagatattcaagcgcagggaccagccgttgatgaattctttaatgatgtgcgcatg
gatgatgatgatgacagacaaccagctcaggaaatggactttggtgacaacttcgatttt
ccacaagaagtagaacatcaagagtgtgctccgatccctatccagagtggattcgctgga
gagaacaaagagaacgaggacgcagaggattggtctgatccgttcggttcttcaaattcc
agcagacgtggccagcttgaagcctatggattcggaaatacttcgacctacaaggaagac
gatggcaaatgggcgaaacgcgccaagcacattctaaagaaagtctccgcggatattgag
acttcgggacaagcggacttctcatctgtcacagcaactgccaagaatcgcaagcaagct
gcagagcaattttattcgttgcttaccctggccaagtctcaagcaataagtgttgatcaa
tcagagccatacggagagatcgtaattcgtccaggagccaatttcaaagaagcatgtcca
ctgagctctccgaaaccgatgggacttggaaatacaatggaaaattccactatgagaacc
ccaatgagaccagtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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