KEGG   Caenorhabditis elegans (nematode): CELE_F26F4.3
Entry
CELE_F26F4.3      CDS       T00019                                 
Symbol
rom-1
Name
(RefSeq) Rhomboid-related protein 1
  KO
K02857  rhomboid-related protein 1/2/3 [EC:3.4.21.105]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cel01002]
    CELE_F26F4.3 (rom-1)
Enzymes [BR:cel01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.105  rhomboid protease
     CELE_F26F4.3 (rom-1)
Peptidases and inhibitors [BR:cel01002]
 Serine peptidases
  Family S54: Rhomboid family
   CELE_F26F4.3 (rom-1)
SSDB
Motif
Pfam: Rhomboid DUF1539
Other DBs
NCBI-GeneID: 184989
NCBI-ProteinID: NP_498029
WormBase: WBGene00004400
Ensembl: WBGene00004400
UniProt: Q19821
Position
III:4907196..4908993
AA seq 356 aa
MFSSEGKFRKTYRHQFNQLRTGDETEIPMSTLASRIETRKIPLTNGQIHAIKEAPDELVD
IDGFQKIVTSKAAQRSTIKRIMYDMADPIMSDSQKIEVHSYIDSYSWCPPPIFMLLITII
QVGIFFFYWESDGGRSIWTDCAGCFVHHNHTAPGIFIFAPKLRGEAWRFTSYMFLHAGLN
HLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAIDPNSLLVGASAGVYALI
FAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTNDCDSVSHLAHIAGAVTG
LFFGYVVLYNVVEHRIEKIIRYVCLFLYSAFFATTIIFVIVRQPYSKNLWNNENCS
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtttagtagcgaaggaaaattccgaaaaacctaccgtcatcagtttaatcaactacgg
acaggagatgagacagagattccaatgtcaacacttgcgtctcgaattgaaacacgaaaa
attccattgacaaacgggcagattcatgcaattaaggaagctccagatgagttggtcgat
attgatggatttcagaaaatcgtgacttcaaaagctgcacaacgatcaacaatcaagcgt
atcatgtatgacatggcagatcctataatgagcgacagtcagaagatcgaagttcactcc
tatattgactcatattcatggtgcccaccgccgatttttatgcttttgatcaccatcatc
caggttggaattttctttttctactgggaatccgacggtggtagaagcatctggacagat
tgtgctggttgtttcgtgcaccataatcatacagctccgggaatcttcatttttgcgcca
aaattgagaggcgaagcgtggagattcacatcctatatgttcttgcatgctggactgaac
catcttctcggaaacgtcatcatccaactattagtcgggattccattggaagttgctcat
aaaatctggaggatcggtccaatttatctgttggcagtgacttctggttctcttctacag
tatgctattgacccgaattcgcttctagttggtgcttccgcaggagtttatgctctcatt
ttcgcacatgtagcaaatgttattctgaattggcatgaaatgccactacgatggatccga
gtcctggtgctcttcgtgttcatctttctggatttcggtggagccattcatcgtcgattc
tatacaaatgactgtgattctgtgtcacatcttgcccatattgctggagcagtcactgga
ttattctttggatatgtagtactttataatgtagtagaacatcgaattgagaaaataatt
cgatatgtttgcctatttctatactctgcattttttgcaaccactattatttttgtgatt
gttcgtcagccatattccaaaaatttgtggaacaacgaaaattgctcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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