KEGG   Caenorhabditis elegans (nematode): CELE_F53G2.7
Entry
CELE_F53G2.7      CDS       T00019                                 
Symbol
mnat-1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03022  Basal transcription factors
cel03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CELE_F53G2.7 (mnat-1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CELE_F53G2.7 (mnat-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cel03021]
    CELE_F53G2.7 (mnat-1)
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_F53G2.7 (mnat-1)
Transcription machinery [BR:cel03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CELE_F53G2.7 (mnat-1)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CELE_F53G2.7 (mnat-1)
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-C3HC4 zf-RING_UBOX zf-RING_2 Prok-RING_4 TRAF3_RING
Other DBs
NCBI-GeneID: 173602
NCBI-ProteinID: NP_001379975
WormBase: WBGene00018769
Ensembl: WBGene00018769
Position
II:complement(2473512..2478643)
AA seq 310 aa
MKECKKCKSNEYTNKQLVMMINECGHPLCKNCVDNIFALNSGNCHVCNRVLRKNNFREQI
YEDPLIDKETFLRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVFETNVNETNAEI
QAFEEKHKEQIDRNKRRLDDDQKWIEDQLREERAMKARMTDHMEMDAKEQEAASAVTDTR
KIMDELRDSNVAAEVILDRERKKQIEKELEEKEEQEKRKRRNKEMLQTRKRAAENMSFNT
VIRVAGRAYVHQPLELVINGPPMPNVSEIEALGYLAHIRQPTAEYIAGGYTPMLGCSRAL
FEARIDLFSF
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaaggagtgcaaaaaatgcaagtctaatgaatataccaacaagcagctcgtcatgatg
atcaatgaatgtggccacccgctttgcaaaaactgtgtggacaacattttcgcattgaat
tctggcaactgtcacgtctgcaaccgggtccttcgaaaaaataatttccgagaacaaatc
tacgaggatccacttatcgataaggagacttttctccgaagaaaactcagaaaaatctat
aatctgaaacaggatgattttgagaatcttcgagagtttggagactatcaggagagattc
gagacagtcgtctacaacctcgtattcgagacaaacgtcaacgagacaaatgccgaaatt
caggcgtttgaggagaagcacaaagagcaaatcgatcggaacaagcgaagactggatgac
gatcagaaatggatcgaagaccaacttcgtgaggagcgagcgatgaaggcgagaatgacg
gatcatatggagatggacgcgaaagaacaagaagccgcctccgcagtcacagacacccgg
aaaattatggacgaacttcgcgattcgaatgtggcggccgaagtaattctggatcgggaa
cgtaaaaagcaaatcgaaaaggaactcgaggaaaaggaggaacaggagaaacgaaaacgc
cgaaataaggagatgttacagacgagaaaacgtgccgccgagaatatgtcgtttaatacg
gtcattcgtgttgccggaagggcttatgttcaccagcccctcgaattggttatcaatggt
ccaccaatgccaaatgtttcggaaatcgaggctctcggctatctggctcacattcgacag
cccactgcggaatacattgccggcggctacactccaatgctcggatgctcacgtgctctt
tttgaggctcgaatcgatttgttttcgttctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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