KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_F59F5.6

Entry

CELE_F59F5.6 CDS T00019

Gene name

syd-2

Definition

(RefSeq) Liprin-alpha

Organism

cel Caenorhabditis elegans (nematode)

SSDB

Motif

Pfam:

SAM_1 SAM_2

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

WormBase:

UniProt:

Position

X:complement(join(10549510..10549575,10549902..10549964,10550077..10550261,10550314..10550635,10551007..10551325,10551370..10551530,10551589..10551711,10551791..10551944,10552039..10552343,10552435..10552600,10552644..10552870,10552921..10553058,10553104..10553277,10553327..10553443,10553537..10553630,10553869..10554002,10554096..10554227,10554277..10554372,10554444..10554773,10554823..10554936))

AA seq 1139 aa
MSYSNGNINCDIMPTISEDGVDNGGPIDEPSDRDNIEQLMMNMLEDRDKLQEQLENYKVQ
LENAGLRTKEVEKERDMMKRQFEVHTQNLPQELQTMTRELCLLKEQLLEKDEEIVELKAE
RNNTRLLLEHLECLVSRHERSLRMTVMKRQAQNHAGVSSEVEVLKALKSLFEHHKALDEK
VRERLRVAMERVATLEEELSTKGDENSSLKARIATYAAEAEEAMASNAPINGSISSESAN
RLIEMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICE
LDAQRTDQETRITTFESRFLTAQRESTCIRDLNDKLEHQLANKDAAVRLNEEKVHSLQER
LELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAEL
ERAVQRERMNEEHSQRLSSTVDKLLSESNDRLQLHLKERMQALDDKNRLTQQLDGTKKIY
DQAERIKDRLQRDNESLRQEIEALRQQLYNARTAQFQSRMHAIPFTHAQNIVQQQPQASI
AQQSAYQMYKQQPAQQYQTVGMRRPNKGRISALQDDPNKVQTLNEQEWDRLQQAHVLANV
QQAFSSSPSLADVGQSTLPRPNTAVQHQQDDMMNSGMGMPSGMQGGMQGGMGGGQDAQML
ASMLQDRLDAINTEIRLIQQEKHHAERVAEQLERSSREFYDDQGISTRSSPRASPQLDNM
RQHKYNTLPANVSGDRRYDIYGNPQFVDDRMVRDLDYEPRRGYNQFDEMQYERDRMSPAS
SVASSTDGVLGGKKKRSNSSSGLKTLGRFFNKKKNSSSDLFKRNGDYSDGEQSGTEGNQK
ADYDRRKKKKHELLEEAMKARTPFALWNGPTVVAWLELWVGMPAWYVAACRANVKSGAIM
SALSDQEIQKEIGISNPLHRLKLRLAIQEMVSLTSPSAPRTARLTLAFGDMNHEYIGNDW
LPCLGLAQYRSAFMECLLDARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLKKVNYDK
KVLADRRKACDNINTDLLVWSNERVQRWVEEIGLGVFSRNLVDSGIHGALIALDETFDAS
AFAYALQIGSQDVPNRQLLEKKFIGLVNDHRQQSDPHPRSGSSRKNDSIAKSYEFHLYT

NT seq 3420 nt +upstreamnt +downstreamnt
atgagctacagcaatggaaacataaattgtgatataatgccgacaatctcggaagatgga
gtggacaacggcggtcccattgatgaaccatcggaccgagacaacattgagcagctgatg
atgaacatgttggaagaccgggacaaattacaagaacagttggaaaattataaggtgcaa
ctggaaaatgcagggctccgaacgaaagaagttgaaaaagaacgagatatgatgaagaga
cagttcgaagttcatacgcaaaatttaccgcaggaacttcaaacaatgacgcgggaatta
tgcctattaaaagagcagttattagaaaaagatgaagagattgtcgagctcaaagcagaa
cggaacaatactcgacttcttctagagcacctagaatgtttagtttcccgtcatgaaaga
tcactccgaatgacggtcatgaagagacaagctcaaaaccacgctggcgtatcttctgaa
gttgaagttctaaaagctcttaagagtttattcgagcatcacaaggcattggatgaaaaa
gttcgtgaacgtcttcgagtagcaatggagcgtgtggcgacacttgaagaagagctgagc
acaaaaggagatgagaattcgtcgctgaaagcgcgtattgccacttacgcagcagaagcg
gaagaagcaatggcgtcaaatgcacccatcaatggttcaattagcagtgaaagtgcaaac
agacttatcgaaatgcaagaggctttagaaagaatgaaaacagaattagccaactcacta
aaacaatcaactgagatcacaacaagaaatgccgaactcgaggatcaattgacagaagat
gctcgtgaaaaacatgctgcacaggaatcaatcgttcgtttgaagaatcaaatttgcgag
cttgatgcacaacgcaccgatcaagaaactcggataacaacgtttgagtcgcgtttcctg
accgcgcaaagagagtcaacgtgtatccgggacctcaatgacaaattggagcatcagctt
gccaataaagatgcggctgtcaggttgaatgaggaaaaagttcattcacttcaagaaaga
ttggagttggcagagaagcaacttgcacaaagtctcaaaaaagctgaatcccttccgtct
gtagaagccgaattacaacaaagaatggaagcacttacagcagctgaacagaagagtgtt
tctgctgaagagcgcatccaaaggttggaccgaaacattcaagagttgtctgcagagttg
gaaagggctgtgcaaagagaacgcatgaacgaagagcacagccaacggttaagtagcact
gtggacaagcttttatcggaatctaatgatcgccttcaactgcatctcaaagaacgaatg
caagccctcgatgacaaaaatcggttaacacaacagcttgatggaacaaagaaaatttat
gatcaagcggaacgaatcaaagatcgtcttcagcgggataatgaatctctacggcaagag
attgaagctcttaggcaacaattgtacaatgcaagaactgcgcaattccagtcaagaatg
catgcaattccgtttacacatgctcaaaacattgtgcagcaacaaccacaagcttcgatt
gctcagcaatctgcataccaaatgtacaaacaacaaccagctcaacagtatcaaactgta
ggaatgagaagaccaaataaaggaaggatttcagcactccaggacgatccgaacaaagtt
caaaccctcaacgagcaagaatgggatcgacttcaacaagcgcatgttcttgccaacgtc
cagcaagcattttcctcatcaccatcactggccgacgtcggtcaatcgactcttccacgt
cctaacactgctgtccaacaccagcaagatgatatgatgaacagtggaatgggaatgcca
agtggaatgcagggaggaatgcaaggtggaatgggtggtggtcaagatgctcagatgttg
gcatcaatgctacaagatcgcttagatgcaataaatactgaaataagattgattcaacaa
gagaaacatcacgcagaacgggtggctgaacagttagaacgatcaagtcgggaattctat
gatgatcagggaatatctacgagaagttcaccaagagcaagtccccaattagataatatg
cgacaacataagtataacactcttcctgcaaatgtatccggtgaccgacggtatgatatt
tacggcaatccgcagtttgttgacgaccgcatggttagagatttggactacgagccacga
cgagggtacaaccaatttgacgagatgcaatacgaaagagatcgaatgagtccagcttcg
tcagtcgcttcctcgacagatggcgttcttggcggaaagaagaaaagatcgaatagctca
agtggattgaaaacgcttggaaggtttttcaacaaaaagaaaaattcatcgagtgattta
ttcaaacgaaatggagattattcggatggcgagcagtcgggcacagaaggaaaccaaaaa
gctgattacgacaggaggaaaaagaagaagcatgaactattagaggaagccatgaaagca
cgaacaccgtttgctctttggaatggtccaactgttgttgcctggctggagctgtgggtt
ggcatgccagcgtggtatgtagctgcgtgtagagcaaatgtgaaatccggtgcaataatg
tcagctttgagtgatcaagaaatccagaaggagattggaatctcaaacccattgcacagg
ttgaaattgcgacttgcaattcaggaaatggtttctttaacgtcaccatctgccccacga
actgctcgtctgactcttgccttcggagatatgaatcatgaatatattggaaacgactgg
cttccttgtctcggtcttgcgcaataccgatcagcgtttatggaatgtcttcttgacgct
cgaatgttagaacatctttcaaaacgtgacctacgcacgcatctgcgcatggtagacaca
ttccatcgtacaagtctccaatacggaattatgtgtctcaagaaagtcaactatgataag
aaagtgttggcggatcggcgaaaggcgtgtgataatatcaacacagacttgctagtgtgg
tcgaatgaacgagttcagcgatgggtggaagaaatcgggctaggtgtattttcaagaaat
ttagtggatagtggaatacatggtgcattaattgcactggatgaaacgtttgacgcatcc
gcttttgcatatgcactccagattggatctcaagacgttcctaacagacaactactggaa
aagaaattcattggcttagtcaacgatcaccgtcaacaatccgatccccatccgagaagt
ggaagttctcgtaagaatgattccatagcaaaatcctacgagtttcatttatatacctag

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

Download RDF

DBGET integrated database retrieval system