KEGG   Caenorhabditis elegans (nematode): CELE_K06A1.5
Entry
CELE_K06A1.5      CDS       T00019                                 
Symbol
atg-16.2
Name
(RefSeq) Autophagic-related protein 16.2
  KO
K17890  autophagy-related protein 16-1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04136  Autophagy - other
cel04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    CELE_K06A1.5 (atg-16.2)
   04136 Autophagy - other
    CELE_K06A1.5 (atg-16.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_K06A1.5 (atg-16.2)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_K06A1.5 (atg-16.2)
Membrane trafficking [BR:cel04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    CELE_K06A1.5 (atg-16.2)
 Others
  Specific organelles associated proteins
   Auto phagosome
    CELE_K06A1.5 (atg-16.2)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CELE_K06A1.5 (atg-16.2)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 EIF3I Beta-prop_EML_2 WDR55 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st ATG16 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd WD40_like Beta-prop_DCAF12 DUF5899 ZapB
Other DBs
NCBI-GeneID: 174067
NCBI-ProteinID: NP_495299
WormBase: WBGene00019427
Ensembl: WBGene00019427
UniProt: Q09406
Position
II:complement(6450889..6453391)
AA seq 534 aa
MTDNRTSFRLEILNRLCKRERQQRCVKDMFKNYSLLDEQLQQSHRSRSVSVNDEHFKGNV
NDRLAVMKEEMANVYRMKSKNDQDLIDANRKLADSESRYSLVSSQRDKLRIETDAIVKKM
TVLENELAELKEENSVINTERVSLVATCNYLTEKKTQLDNERFQLLNRIRELQEKSAEFM
NAEIALQEERAQMRIREQIAKATADLNLGDERASSAFGTSPETLDEFMMTDVLPSEVKFK
LSTHDGEVHDVEWMSDDTFATAGSDSKVQIWRVSPNKTDASKVSTLSGCLGPVNRLDYDS
QRHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQSHNVISGSADRTIKNWDI
SSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARSSDATYSVELGQKVSS
LDISMDGLQVLASSRDDTLSLIDVRNYGIIHLYSAEQYKTSCDSTRAIFSSTGEYVLAGS
SNSSVFIWNTKTTKLEKVVKTARSDSAQIMSLAWNPSGRGLLACDRQKTCTLWR
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgaccgacaatcggacttcctttcgcttggaaatactgaatcgattgtgcaaacgagaa
cgccagcaaagatgtgtgaaagacatgttcaaaaattattcgttattggatgaacaattg
caacaatcacaccgatcgagatctgtttctgtaaacgatgagcactttaaaggaaatgta
aacgatcgattagctgttatgaaagaagaaatggcaaatgtatacagaatgaaaagtaaa
aatgatcaggaccttattgatgcaaatagaaagttggctgacagtgaatctcgttattct
ctggtttcctcacagagagataaattgagaatagaaaccgatgctattgtaaaaaaaatg
actgtattagagaacgagttggccgaattgaaagaagaaaattctgtgataaacactgaa
agagtatctcttgttgcaacttgcaattatcttaccgagaagaaaacgcagctagataac
gaacgatttcagttattaaacagaatacgtgaactacaggaaaagtctgcggaatttatg
aatgctgaaatagctttgcaagaagaacgcgcacagatgcgaatcagagaacagattgca
aaagctacggctgatttaaatttaggtgacgagcgagcatcttcagcatttggtacatct
cccgaaactttagatgagtttatgatgaccgacgtcttaccatcagaagttaagttcaaa
ttgtctacacacgatggagaagttcatgatgttgaatggatgtctgatgatacatttgcg
acagctggaagtgattcaaaagttcaaatttggagagtttcgccaaataagacggatgct
tcaaaagtttcaactctttctggctgtctgggaccagttaatcgtttggattacgacagt
caacggcatgtatgtcttgcttccagtaacgataaaacatgcagattatggaatattgat
tcgcaaagactattgagtacgttttctggccatacggataaggtttcatctgcaagatta
ttccagtcacacaatgtcatatctggatctgcggatcgtacaatcaagaattgggatatc
agtagtattcgttgtctcaaatcatatcttgttggatccacagtatttgatattgttgct
aaatgtggtgtttctcaatccagcttcatttcttcccattttgataaaaaggttcggttc
tgggatgcacgctcttcagatgcaacgtattcagtagaactcggacaaaaagtcagctct
cttgatatctcgatggatggtcttcaagttcttgcttcatcacgagatgatacactttcc
ttgatcgatgttcgcaactatggaattattcatctctactcagcagaacagtataaaact
agctgtgatagtacgagagcaatcttttcatctacgggagaatatgtgctggctggatct
tcgaattcgtctgttttcatttggaatacaaaaaccacaaagttggaaaaagttgtgaaa
actgcgagatcagattcggctcaaataatgtctctggcatggaatccgtcaggccgaggt
cttctagcttgtgatcgtcagaagacttgtacactctggagatga

  All links  
Gene (22)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (26)   
   Pfam (26)   
All databases (52)   

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