KEGG   Caenorhabditis elegans (nematode): CELE_M18.7
Entry
CELE_M18.7        CDS       T00019                                 
Symbol
aly-3
Name
(RefSeq) Chromatin target of PRMT1 protein C-terminal domain-containing protein
  KO
K12881  THO complex subunit 4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03013  Nucleocytoplasmic transport
cel03015  mRNA surveillance pathway
cel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CELE_M18.7 (aly-3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    CELE_M18.7 (aly-3)
   03015 mRNA surveillance pathway
    CELE_M18.7 (aly-3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_M18.7 (aly-3)
   03041 Spliceosome [BR:cel03041]
    CELE_M18.7 (aly-3)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CELE_M18.7 (aly-3)
    TREX complex
     CELE_M18.7 (aly-3)
Spliceosome [BR:cel03041]
 Complex C
  Other components
   EJC/TREX
    CELE_M18.7 (aly-3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CELE_M18.7 (aly-3)
SSDB
Motif
Pfam: FoP_duplication RRM_1
Other DBs
NCBI-GeneID: 178157
NCBI-ProteinID: NP_001076697
WormBase: WBGene00000122
Ensembl: WBGene00000122
UniProt: Q21559
Position
IV:12123282..12124809
AA seq 240 aa
MVKATNVDLSLEDIISKTRKTTGSIQKKSFGGARRGNTRPTGLPRRSGGSGGWKDLDAVQ
NHGISSRGNDSKVIRVNISNLAPTVISSDLEELFGDYRLSSVSVNFNEHGDSLGTGDISL
TKRDAERLVQKFSGVALDGKIMKFAVIDSSNMAGRVDFGNRSRSSPGRSSRGFQSGPRRN
NGKPEDFLRDGVHAGDIKRGGAGRGGFRKGGRGGARDAKPKKTEAELDAELEAYMAKRNA
NT seq 723 nt   +upstreamnt  +downstreamnt
atggttaaggctaccaatgtcgatttgtctcttgaggacatcatctctaaaaccagaaag
acaactggaagcattcaaaagaaatccttcggaggagctcgacgaggaaatacgagaccc
actggacttccacgccgctccggcggaagtggtggatggaaagacttggacgcggttcag
aatcatggaatttcaagcagaggaaatgatagcaaggttattagagtaaatatctctaat
cttgccccaacagtcatttcaagcgatttggaggaactcttcggcgactacagactcagc
tcagtttcggtcaacttcaacgagcatggtgattcattgggtactggtgacatttcgctc
accaaacgtgatgctgagagacttgttcagaagtttagcggtgtcgctctagatggaaag
atcatgaaattcgccgtcattgattcgagcaacatggctgggagagtcgattttggaaac
agatctcgtagttcaccgggaagatcatctcgtggattccaatcgggtcctcgcagaaac
aatggcaaaccagaagatttcctccgcgacggagtgcacgccggtgacatcaagagaggc
ggagctggtcgaggtggattccgcaagggaggccgtggtggagctcgtgatgcaaaacca
aagaagaccgaagctgaactcgacgcggagctcgaagcctacatggcgaagcgaaatgcc
tga

  All links  
Gene (16)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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