KEGG   Caenorhabditis elegans (nematode): CELE_R13G10.2
Entry
CELE_R13G10.2     CDS       T00019                                 
Symbol
amx-1
Name
(RefSeq) Lysine-specific histone demethylase 1B homolog
  KO
K19413  lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_R13G10.2 (amx-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    CELE_R13G10.2 (amx-1)
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO SWIRM Pyr_redox Pyr_redox_2 Thi4 VMAP-M8 FAD_binding_3 NAD_binding_9 FMO-like MurD-like_N HI0933_like Pyr_redox_3
Other DBs
NCBI-GeneID: 175493
NCBI-ProteinID: NP_497772
WormBase: WBGene00000137
Ensembl: WBGene00000137
UniProt: Q21988
Position
III:3822403..3826260
AA seq 824 aa
MTTELEIDDRKEEEAQIPGETSESEEGDEPVKMNRVKRACAMAAESLKEAKRIKNMLMEE
ECVLQLGNCKKTASYGHRLSKTEACCPSCFSVAFRGKDYENEFTIWKQKAMDGQTHVRSE
QFVKRYVNSCFLPYYAKCHQCSKYSKLITSDSLSAQQLSDFKCDCASTIESPKIERVRED
SEWCFNEFGHPPLLQNNISYDLLVDHYVTRTTGMDATCQEKAALIDNGGIEFRDTRRIMN
MFYVPFTDVIANIVHPEFMETDEKFAFPKFADDPISIYYLQVRNTIIAMWLKHPFVELTV
KMIEPQIIVRGHARIFFIEHLIHPILEFLTIKGVVNYGAFDFRIDPLNGMRPKIAIIGAG
ISGISTARHLKHLGIDAVLFEAKDRFGGRMMDDQSLGVSVGKGAQIIVGNINNPITLLCE
QIGIKYRNSNFFCPLIDENGRCFTLERKELDDQVDLHYNNVLDAIRNKYQSDRNFPDVPL
EVTNFRHFTEMFSKMSSGLLSAADLDSLYTPEFEKLLDFHLGNLEFSCGTHVSNLSAKDY
DHNEKFGNFAGEHAVITDGAQRIIDFLATGLDIRLNCPVKCIDWGRDDRKVKIFFENAEQ
AAEEFDKVVITTSLSVLKSNHSKMFVPPLPIEKQKAIDDLGAGLIEKIAVKFDRRFWDTV
DADGLRTEYFGKVSDCKTDRSLFNIFYDFSGKDPNGEDTFVLMSYVTAEHVNLVNVLTES
EVADKFCATLRKMFPSAVINPLGHMMSHWGADRFVGMSYTFVPFGSDGDATYNQLKKSID
EKLYFAGEHTIAAEPQTMAGAYISGLREAGQIVMSLKRDSATFE
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgacaacagaacttgaaatagacgatagaaaagaagaagaagctcaaattcctggagaa
acgagtgaaagtgaagagggagatgaacctgtaaaaatgaatcgcgtaaaacgcgcctgt
gcaatggcagccgaatctttaaaagaggcaaaaagaataaagaacatgttgatggaagaa
gaatgtgttttacaattgggtaattgtaagaaaactgcaagttatgggcatagattgagt
aaaactgaagcatgttgtccatcgtgctttagtgttgcatttcgtggaaaggattatgag
aatgagtttacaatttggaagcagaaggcaatggatggacagacacatgttcgaagtgaa
caatttgttaaacgatatgttaatagctgcttcctaccatactacgcaaaatgccaccaa
tgctcaaaatactccaaattgataacctccgactctctctctgctcaacaattatccgac
ttcaagtgcgactgtgcttctacaattgaatcccccaagattgaacgagttcgtgaagac
tcagaatggtgtttcaatgaatttggacatcctcctttacttcaaaataatatttcctat
gatctactagttgatcactacgttacacggaccactggaatggatgccacgtgtcaggag
aaggcggcgttgattgacaatggtggcatcgaatttcgagatacaagaagaattatgaac
atgttttatgttccatttacggatgttattgcgaatattgtacatcccgagtttatggaa
accgatgagaaatttgcattccctaaatttgctgatgatcccatttcaatctactacctc
caagtccgaaatacaattatcgcaatgtggctgaagcatccattcgtcgagttaaccgtg
aaaatgattgaaccccagattattgtcagaggtcatgcgaggatattctttattgaacac
ctcattcatccaattttggaatttttgacaattaaaggagttgtcaattatggagcattt
gatttcagaattgatccattgaatggaatgagaccgaaaattgcaataattggagcagga
atatctggaatctcaacagcccgccacctaaaacatttgggaattgatgctgttctcttc
gaagcaaaggatcgcttcggtggacgtatgatggatgatcaatcacttggagtatcagtt
ggaaagggagctcagattattgttggaaatatcaataatccaattactcttttgtgtgaa
caaattggtattaaataccgaaattcgaactttttctgtccacttattgatgagaatgga
cggtgctttacattggaacgaaaggagttggatgatcaagttgatttgcattataataat
gttcttgatgcaattcggaataagtatcagagcgatcggaattttccggatgttcctcta
gaagttaccaatttccggcactttacagaaatgttctcgaaaatgagttccggattgctc
tcggccgccgacttggactctctctacactcctgaatttgaaaaacttttggattttcat
ctaggaaatctggaattctcttgtggaacccatgtttcaaatctttcggcaaaagactat
gatcataatgaaaagtttggaaactttgccggagagcatgcagttatcactgatggagca
cagagaattattgattttttggcaactggattggatattcgactgaattgccctgttaag
tgcattgattggggcagagatgatcgaaaagtcaaaatattctttgaaaatgctgaacaa
gcagcggaagagtttgataaagtagttatcacaacttccctatcagtactcaaatcaaat
cattcaaaaatgttcgttcctccacttccaattgaaaaacagaaggctattgatgatctg
ggcgctggattaattgagaagatcgctgtgaagtttgacagaagattttgggatactgta
gatgctgatggattgcgaacggaatatttcggaaaggtttccgattgcaagactgatcga
agtctcttcaatatattctacgacttttctggaaaggaccccaatggcgaggacaccttc
gtcctaatgtcctatgtcaccgctgaacacgtgaatcttgtcaatgtactaacggaatcg
gaagtcgccgacaaattctgtgcaacccttcggaagatgttcccatcagctgttattaac
cctctaggacatatgatgtcccattggggtgctgatcgattcgtcggtatgtcgtacact
tttgtcccatttggatcggatggtgatgctacgtataatcaactgaaaaagtcaatcgac
gagaagctctactttgcgggagaacatacaattgcagcggaaccgcagactatggcagga
gcctatatttcaggattacgagaagccgggcagattgtgatgagtttgaagcgggattcg
gccactttcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (49)   

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