KEGG   Caenorhabditis elegans (nematode): CELE_T10F2.1
Entry
CELE_T10F2.1      CDS       T00019                                 
Symbol
gars-1
Name
(RefSeq) Glycine--tRNA ligase
  KO
K01880  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CELE_T10F2.1 (gars-1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cel01007]
    CELE_T10F2.1 (gars-1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cel03016]
    CELE_T10F2.1 (gars-1)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_T10F2.1 (gars-1)
Enzymes [BR:cel01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     CELE_T10F2.1 (gars-1)
Amino acid related enzymes [BR:cel01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CELE_T10F2.1 (gars-1)
Transfer RNA biogenesis [BR:cel03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CELE_T10F2.1 (gars-1)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    CELE_T10F2.1 (gars-1)
SSDB
Motif
Pfam: HGTP_anticodon WHEP-TRS tRNA-synt_2b DUF5915 YlaC
Other DBs
NCBI-GeneID: 175703
NCBI-ProteinID: NP_498093
WormBase: WBGene00001744
Ensembl: WBGene00001744
UniProt: Q10039
Position
III:complement(5159729..5163627)
AA seq 742 aa
MFSSCWLKSSVRYSRLIRQFSSENSFFKVELVPSDRKTPLQPRKVVAPRFEKKTRQKISD
YLKQMATPEIEAKLAPLRAAVKEYGDLIRDLKAKGAPKIDIDKAVVELKARKRLLEDTEI
ALAPKEASFDRLKLEDLLKRRFFYDQSFAIYGGVTGLYDFGPMGCSLKANMLQEWRKHFI
LEEGMLEVDCTSLTPEPVLKASGHVDRFADWMVKDMKNGECFRADHLIKNSIEKLLNDKK
TSAAVKQDGQDVLARLEGFDNKDMHEVITRFNFKSPITGNDLTEPIAFNLMFPTQIGPTG
DFKAFLRPETAQGIFVNFKRLLEFNQGKLPFAAAQIGLGFRNEISPRQGLIRVREFTMCE
IEHFVDPEDKSLAKFAKVADQKLVLFSACNQLDGAPAQEVAIGEAVAKKTVANETLGYYM
ARCHQFLMKVGIDGRRLRFRQHLSNEMAHYAQDCWDAEILTSYGWIECVGNADRACYDLQ
QHYKATNVKLVAEKKLPEPVDVNFVEAQANMALLGKSFKKDAKKIQTSLQQLTSEQVSAL
EEELLAKKLYNLSVDGQNYALTPEHLNIKKYTKKIHVQEITPSVIEPSYGIGRIMYALLE
HSFRQREGDEQRTFLAFKPLVAPIKCSVLPISANDTLIPVMDAVKEELSRFEMSYKVDDS
SGTIGRRYARTDEIGIPFGITVDFDSLKTTPFTVTIRHAETMSQIRLEVSELGRLISDLV
AGRQQWSDAQAKYPKFEASATE
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgttctctagttgctggttaaaaagcagcgtccgatactcgcggttaataagacaattt
tcatcggaaaattcatttttcaaggttgaactagtcccaagtgaccggaaaactccactt
caacccagaaaggtagtcgcaccgcggtttgagaagaaaaccaggcaaaaaatatcggat
tatttgaagcaaatggctactccggaaattgaagcgaaactcgcccctcttcgtgctgca
gtaaaagagtatggagatctgatccgtgatctcaaggcgaaaggtgctccaaaaatcgac
atcgataaagcggttgttgaattgaaggctagaaagagacttcttgaagacacagaaatt
gctttggcaccaaaagaagcatcattcgatcgtctgaaattggaggatcttctcaaaaga
cgattcttctatgatcaatcatttgctatctatggtggtgtcactggtctctacgatttc
ggtccgatgggatgttccttgaaggctaatatgctccaagaatggagaaaacatttcatt
cttgaagagggcatgttggaagttgactgtacttctctcactcctgaaccagttctgaaa
gcttctggacacgttgacagatttgctgattggatggtgaaggatatgaagaatggagaa
tgcttccgtgctgatcatttgatcaagaatagcattgagaagttgttaaatgataaaaag
actagcgctgcagtcaaacaagacggacaggatgtgcttgcgcgtcttgaaggattcgat
aataaggatatgcatgaagtgatcactcgattcaatttcaagtctccgatcactggaaat
gatctcaccgaaccaatcgcattcaacttgatgttcccaactcaaattggaccaactggt
gacttcaaagcattccttcgaccagaaaccgctcaaggaatctttgtgaatttcaaacga
cttttggagttcaaccaaggaaaattgccattcgctgctgcacaaatcggattgggattc
agaaatgaaatttctccaagacaaggtctcattcgtgttcgtgaattcacaatgtgcgaa
attgagcattttgtcgacccagaagacaagagcttggcaaaatttgcaaaggttgctgat
caaaagcttgttcttttctcggcttgcaatcaattagacggtgctccagctcaggaagtt
gctattggcgaggctgttgccaagaaaactgtagccaatgagacactcggttattacatg
gctcgttgtcatcaattcctcatgaaggttggtattgatggacgtcgtctccggttccgc
caacatttatcaaacgaaatggctcactacgctcaagactgctgggacgctgaaatcttg
acctcttatggatggatcgaatgtgttggtaacgctgatagagcttgctacgatctccaa
caacattacaaagcaacaaacgtcaagttggttgccgagaagaagctcccagagccagtc
gatgttaattttgtcgaggcacaagccaacatggctttgctgggcaagagcttcaaaaag
gacgctaagaaaattcaaacatcgctccaacaactcaccagtgaacaagtctcggctctt
gaagaagagcttctcgccaagaagctgtacaatctcagcgtggacggccagaattacgcg
ttgaccccagagcatctgaatattaagaaatacacgaaaaagattcacgtacaagagatt
actccatcagttattgaaccatcgtatggtatcggaagaattatgtatgctcttctcgag
cactcgttcagacaaagagaaggagatgaacagaggactttcttggctttcaagccatta
gttgcaccaatcaaatgctcagttcttccaatttcagccaatgacacattgattccagtt
atggatgccgttaaggaggaactctcacgctttgagatgagttacaaagtggatgacagc
tccggcaccattggtcgccgttacgcacgtactgatgagattggtattccattcggaatc
actgttgactttgattcattgaagaccactccattcactgtcaccatccgccacgctgaa
acaatgtcacagattcgattagaagtctcagaactcggaagactcatttctgatcttgtc
gctggccgtcaacaatggtccgatgctcaggccaaatatccaaaattcgaagcgagcgca
actgaataa

  All links  
Gene (27)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

Download RDF
DBGET integrated database retrieval system