KEGG   Caenorhabditis elegans (nematode): CELE_W03B1.4
Entry
CELE_W03B1.4      CDS       T00019                                 

Gene name
sars-2
Definition
(RefSeq) AA_TRNA_LIGASE_II domain-containing protein
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CELE_W03B1.4 (sars-2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cel01007]
    CELE_W03B1.4 (sars-2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cel03016]
    CELE_W03B1.4 (sars-2)
Enzymes [BR:cel01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     CELE_W03B1.4 (sars-2)
Amino acid related enzymes [BR:cel01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CELE_W03B1.4 (sars-2)
Transfer RNA biogenesis [BR:cel03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CELE_W03B1.4 (sars-2)
 Prokaryotic type
    CELE_W03B1.4 (sars-2)
SSDB
Motif
Pfam: tRNA-synt_2b tRNA-synt_2d
Other DBs
NCBI-GeneID: 177200
NCBI-ProteinID: NP_500549
WormBase: WBGene00005662
Ensembl: WBGene00005662
UniProt: G5EF77
Position
IV:join(4357641..4357831,4357906..4358213,4358664..4359141,4359475..4359724,4359777..4359875)
AA seq 441 aa
MQRLSQALRSTRISQGIGFARRFTSSEASTSEESSSAPPVMRPDLNFEFLLDEKNLEAIR
ENILNRKGVGDIDKVHKKWAVIQKMMKSGEKQTNGAVSEQKYKQLWDELYDEAILIPNMT
QDGVPRGSEDQAKIVAEWGEKREDECLTAEKLVQTWRSLLHPTDASGQRSYVFLGALASL
EKALLDYAHERVCALGFRPITVPDIVSGEVTQACGVMQRSDHPIQYTLAGEESHTKLSGT
AEMGIAAFLRGRTFNQDQLPIRLVSLSRCFRTEISKSASEAKLYRVHEFSKVEMFVVSTP
EQSAAELDYLVEVQKGTFQALGVHCRQLEMPSEELGASAARKFDIEAWMPGRKLYGEVSS
ASNCTDFQSRRLGIKYKTADGTTKYAHTCNGTALASTRALISVLETFQNDKKGLGELPEP
LRKRVKQRGSPLRFQPAKSLV
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcaaagattaagccaagctcttcggagcactagaataagtcaaggaatcgggtttgcc
agaagattcacgtcatcagaagcttcaacatcagaagaaagctcatctgcaccgcctgtc
atgaggccagacttgaatttcgaatttttactggatgagaagaatttagaagcaattcga
gagaacattttaaatcgaaaaggagttggcgatattgacaaagtgcacaaaaaatgggcc
gtaattcaaaaaatgatgaaatccggtgaaaagcagacaaatggagctgtctccgagcaa
aaatataagcagctgtgggatgagctctacgatgaggcgattcttataccgaatatgaca
caggacggtgtgccacgtggcagtgaagatcaggcgaaaattgtggccgaatggggtgaa
aaacgagaagatgaatgtttgacagcggagaaattggtccaaacctggagatcactgctt
catccaactgatgcttcaggtcaacgctcttacgtattcctcggagccctggcaagtctg
gaaaaagcccttctggattatgctcacgaaagagtatgtgctctaggctttcgtccaatt
acagtacccgatatagtgtctggagaggtgacacaagcctgtggagttatgcaacgaagt
gatcatccaattcaatacaccttagctggagaagaatcacacacaaaactctcaggaact
gctgaaatgggaatcgccgcgtttttacggggacgaactttcaaccaagatcaacttccg
attcgattggtctcactgagtcgatgcttccgaactgagatcagcaagtcggcgagcgag
gcgaagttgtacagagttcatgagttcagcaaggttgagatgttcgtggtgagcacgccg
gagcaaagtgcggcagagctggattatttggtggaggtgcagaagggaacattccaggcg
ttgggtgttcattgcagacaacttgaaatgccatccgaagagcttggagcctctgccgcc
cggaaattcgacattgaagcttggatgccggggcgaaaactctacggagaggtttcatcg
gccagtaattgcacggatttccagtctcgacgcctcggaatcaagtataaaactgctgat
ggaacgacgaaatacgctcatacgtgtaatggaaccgctcttgcgtcgactagagctctc
atttctgtgctggaaacttttcagaatgacaaaaaaggactcggcgagcttccagaacct
cttcgaaaacgtgtcaagcaacgtggaagcccacttcgtttccaaccagcgaaatcactt
gtttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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