KEGG   Caenorhabditis elegans (nematode): CELE_Y46G5A.19
Entry
CELE_Y46G5A.19    CDS       T00019                                 
Symbol
spds-1
Name
(RefSeq) PABS domain-containing protein
  KO
K00797  spermidine synthase [EC:2.5.1.16]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel00270  Cysteine and methionine metabolism
cel00330  Arginine and proline metabolism
cel00480  Glutathione metabolism
cel01100  Metabolic pathways
Module
cel_M00034  Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    CELE_Y46G5A.19 (spds-1)
   00330 Arginine and proline metabolism
    CELE_Y46G5A.19 (spds-1)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    CELE_Y46G5A.19 (spds-1)
Enzymes [BR:cel01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.16  spermidine synthase
     CELE_Y46G5A.19 (spds-1)
SSDB
Motif
Pfam: Spermine_synth Spermine_synt_N Methyltransf_25 Methyltransf_12 MTS Methyltransf_23 BpsA_C
Other DBs
NCBI-GeneID: 174914
NCBI-ProteinID: NP_001367196
WormBase: WBGene00012909
Ensembl: WBGene00012909
UniProt: B4E3X6
Position
II:<12806899..>12810872
AA seq 366 aa
MNKLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEK
SKYQDVLVFESTTYGNVLVLDGIVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDG
GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKN
EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGECPWLDMKLISTVIHSAR
DLFPVAKYAVGSVPTYTSGLMGYILCAKDKVNTGESVWLHLPLIAHLVAFNRKIFPAVTY
AQSIVSTYPSGSMGYLICAKNANRDVTTPARTLTAEQIKALNLRFYNSEVHKAAFVLPQF
VKNALE
NT seq 1101 nt   +upstreamnt  +downstreamnt
atgaacaagctgcacaagggatggttcaccgagttctcgccggatgacctggaaaagatg
aacggagcctccgacgaggagccaacgaaggtgctcaaatccgacggacaagagatgggc
ggcgcgtggccgggacaggcgttctcgttgcaggtgaagaaagtgcttttccacgagaag
agcaagtatcaggatgtgctggtttttgagagcacaacctatggaaatgttctagttcta
gacggaattgttcaggcaactgaacgggatgagttctcctaccaggaaatgctggcccat
ctcccaatgtttgcccatccggacccgaaacgtgtacttatcattggtggaggagatgga
ggtattttgagagaggtcttgaagcacgagtccgtcgagaaggtcacaatgtgtgaaata
gacgaaatggtgatcgatgtcgcgaaaaagttcctgcctggcatgtcgtgcggtttctca
cacccgaaactcgacttattctgcggagatggcttcgaatttttgaaaaatcacaagaac
gagttcgacgtaattatcacggacagttccgatccagttgggccggctgaatcgcttttc
gggcaaagttattacgagttgctgagagatgcgttgaaggaggatggaattttgtcatcg
caaggcgaatgcccatggctagacatgaagctcatctctaccgtaatccattcggctcgt
gacctatttcccgtggcaaagtacgcggttggcagcgtgccaacctacacgtcaggcctg
atgggctatattttatgcgcaaaggataaggtgaacactggagaatctgtgtggcttcac
ctcccactaatcgctcatctcgtcgccttcaatcgaaaaattttcccggccgtcacctac
gcccagtcgatcgtctctacctacccgtctggaagcatgggatacctgatttgtgcaaaa
aatgctaaccgtgacgtcacgactcctgctcgaaccctcactgctgaacagatcaaagcc
ctgaacttgagattctacaactcggaagttcacaaggcggcttttgtgcttccgcaattt
gtcaaaaatgctttggagtag

  All links  
Gene (34)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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