KEGG   Caenorhabditis elegans (nematode): CELE_Y87G2A.3
Entry
CELE_Y87G2A.3     CDS       T00019                                 
Symbol
atg-4.1
Name
(RefSeq) Cysteine protease atg-4.1
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04136  Autophagy - other
cel04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    CELE_Y87G2A.3 (atg-4.1)
   04136 Autophagy - other
    CELE_Y87G2A.3 (atg-4.1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cel01002]
    CELE_Y87G2A.3 (atg-4.1)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_Y87G2A.3 (atg-4.1)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_Y87G2A.3 (atg-4.1)
Peptidases and inhibitors [BR:cel01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   CELE_Y87G2A.3 (atg-4.1)
Membrane trafficking [BR:cel04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    CELE_Y87G2A.3 (atg-4.1)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CELE_Y87G2A.3 (atg-4.1)
SSDB
Motif
Pfam: Peptidase_C54 Peptidase_C78
Other DBs
NCBI-GeneID: 190777
NCBI-ProteinID: NP_001359618
WormBase: WBGene00013595
UniProt: K8ESC5
Position
I:complement(<13536967..>13542395)
AA seq 454 aa
MTEEILKQGVGIVETSLTFEPPFCESFERISIDNFPIFALGKEISKEDGIEAMKKYVTSR
FWFTYRRDFSPIGGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEWDIEKTSEIYEK
ILQMFFDEKDALYSIHQIAQMGVTEGKEVSKWFGPNTAAQVMKKLTIFDDWSNIAVHVAL
DNILVKEDAITMATSYPSEDAVKLIMENGLVDKNRLSLSPGNIIPEWRPLLLMIPLRLGL
TTINPCYLSAIQEFFKIPQCVGIIGGRPNHALYFVGMSGSKLFYLDPHYCRPKTESTAKM
YAEKDSTATTDDVGFSHLEELVPLPSQTADVYTKMDDSTYHCQMMLWIEYENVDPSLALA
MFCETRDEFENLCETLQKTTLPASQPPMFEFLQRRPKYLPKFEPYTGVSMKIEMKEFDDI
GAANVKIDDDFEVLDVHTEEEDADEDNDDDVANA
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgaccgaagaaattctgaaacaaggcgtcggaattgtggaaacctcattgacatttgag
ccgcctttttgtgaatcttttgagcgaatttctatcgataatttcccgatttttgcgctc
ggaaaggagatttcaaaggaagatggaatcgaggcaatgaaaaagtacgtcacatcgaga
ttttggttcacttatcgcagagatttctccccaattggtggcacaggccctagcacggat
caaggatggggttgcatgctgagatgcgcacagatgcttctcggagaagtactccttcgc
cgtcacattggacgccattttgaatgggatattgagaagacttcagagatttatgaaaag
attttacaaatgtttttcgacgaaaaagacgcgctttactcgattcatcaaattgctcaa
atgggtgttactgaaggaaaagaagtctcaaaatggtttggaccaaatacggcggctcaa
gtaatgaagaagctcacaattttcgatgattggtcgaatatcgccgtccacgtggcactt
gataatattcttgtgaaagaggatgctattacaatggcaacatcatatccaagtgaagat
gctgttaaacttattatggaaaacggcctcgtcgacaaaaaccgtctctccctctcccca
ggcaatataatccccgaatggcgtccccttctcctaatgattcccctacgtttgggtctc
accacgatcaatccatgctatttatcagcaattcaagaattctttaaaatcccacaatgc
gtcggaattatcggtggtcgaccaaatcatgctctatactttgttggaatgtctggttcg
aaacttttctatctggatcctcactattgccggccaaaaactgaatcgacggccaaaatg
tatgcagaaaaagattccacggccaccaccgatgacgtaggcttcagtcatttggaagaa
cttgttccattaccatctcaaaccgcagacgtttacacgaaaatggatgattccacgtat
cattgtcaaatgatgttatggattgagtatgagaatgtggatccttcactcgcgttggca
atgttttgtgagacacgtgacgagtttgaaaatctgtgcgagacccttcaaaaaaccaca
ttgcctgcctcccaaccgcccatgttcgagtttttgcagcggcggcccaagtatttgcca
aaattcgaaccatacactggcgtttcgatgaagattgagatgaaggaattcgatgacatc
ggcgccgccaacgtgaaaatcgatgatgattttgaagttttggatgttcatacagaagaa
gaagacgcagacgaagacaatgatgatgacgtggcaaatgcctaa

  All links  
Gene (12)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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