KEGG   Cellulomonas shaoxiangyii: E5225_08660
Entry
E5225_08660       CDS       T05988                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
celz  Cellulomonas shaoxiangyii
Pathway
celz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:celz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E5225_08660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:celz03021]
    E5225_08660
   03400 DNA repair and recombination proteins [BR:celz03400]
    E5225_08660
Enzymes [BR:celz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E5225_08660
Transcription machinery [BR:celz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E5225_08660
DNA repair and recombination proteins [BR:celz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E5225_08660
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: QCB93623
UniProt: A0A4P7SM22
Position
complement(1899708..1899971)
AA seq 87 aa
MSGTVAAPTGITDPPIDRLLERADSKYALVLFSAKRARQINAYYAQLNEGLLEYVGPLVE
TRPQEKPLSIAMREIDQGLLTSEATEG
NT seq 264 nt   +upstreamnt  +downstreamnt
gtgtccggaaccgtcgccgcccccacgggcatcaccgacccgccgatcgaccgcctcctc
gagcgcgccgactcgaagtacgcgctcgtgctcttctccgcgaagcgcgcgcgccagatc
aacgcctactacgcccagctcaacgagggcctgctcgagtacgtcgggccgctcgtcgag
acgcgcccgcaggagaagccgctctcgatcgccatgcgcgagatcgaccagggcctcctg
acgtccgaggcgaccgagggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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