KEGG   Cedecea neteri M006: LH23_00350
Entry
LH23_00350        CDS       T03328                                 
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridylate synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
cem  Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:cem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cem03009]
    LH23_00350 (rluD)
Enzymes [BR:cem01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     LH23_00350 (rluD)
Ribosome biogenesis [BR:cem03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LH23_00350 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2 TruB_N
Other DBs
NCBI-ProteinID: AIR59157
Position
complement(67412..68392)
AA seq 326 aa
MAQLVQLTETVSDSQLGQRLDQALAELFPDYSRSRIKEWILDQRVTVNGVVWDKPKEKVL
GGESVTINAEIEEEVRWEAQDIPLNIVYEDEDILVINKPRDLVVHPGAGNPDGTVLNALL
HYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQLREITREYEAVAIGHMT
GGGTVEEPISRHPTKRTHMSVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHM
AHISHPLVGDQLYGGRPRPPKGASEEFVSVLRKFDRQALHATMLRLYHPISGILMEWSAP
IPQDMVELIEALRADTETHKDQLDWL
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcacaactagtacaactcaccgaaacggtgtccgattcacaactgggtcaacgctta
gatcaggcattggccgaattgttcccggattattcgcgttcgcgcataaaagaatggatt
cttgaccagcgagttacggtcaacggcgttgtctgggacaagccgaaggagaaagtgttg
ggtggcgaaagcgtaaccatcaatgctgaaattgaagaagaggtgcgctgggaggctcag
gacatcccgctgaatatcgtctatgaagatgaagatattctggtgatcaataagccacgc
gatctcgttgtacaccccggcgcgggcaatccggacggcacggtgttgaatgcgctgctg
cactattatccgccaattgcggatgtgccgcgtgcgggtattgtgcaccgtctggataaa
gacaccaccggcctgatggttgtagcaaaaactgttccggcgcaaactcgcctggttgaa
gcccttcaactgcgtgaaattacccgtgagtacgaagctgtggctattggtcacatgact
ggcggtggtacggtagaagaaccaatcagccgccatccaactaaacgtacccacatgtcc
gtgcatccaatgggcaaaccagcggtgacacactaccgcattatggaacacttccgcgtg
catacgcgcctgcgtctgcgcctggaaaccggccgtactcaccagatccgcgttcacatg
gcacatatcagccatccgctggtgggtgatcagctttacggtggccgtcctcgtccgccg
aaaggcgcatcggaagaattcgtcagcgtactgcgcaagtttgaccgccaggcgctacac
gcgaccatgctgcgcctgtaccatcctatcagcggtattctgatggagtggagcgcgccg
atcccacaggatatggttgaactgatcgaagcgctacgtgctgataccgaaacccataaa
gatcaactggactggctatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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