KEGG   Cedecea neteri M006: LH23_01165
Entry
LH23_01165        CDS       T03328                                 
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
cem  Cedecea neteri M006
Brite
KEGG Orthology (KO) [BR:cem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cem03009]
    LH23_01165 (rumA)
Enzymes [BR:cem01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LH23_01165 (rumA)
Ribosome biogenesis [BR:cem03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LH23_01165 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr TRAM Methyltransf_31 PCMT Methyltransf_25 RrnaAD MTS Met_10 Cons_hypoth95 Methyltransf_11 Methyltransf_4 FtsJ Methyltransf_23 MetW CMAS Ubie_methyltran Methyltr_RsmB-F Ribosomal_L22
Other DBs
NCBI-ProteinID: AIR59310
Position
complement(241818..243131)
AA seq 437 aa
MAQFYSAKRRDTNRELLTVTVTDLDPFGQGVARHKGKALFIRGALPGEQVEVRITEDKRS
YAQAEVKRRLNDSPERVKPRCPHFGVCGGCQQQHASVALQQEAKSKALGRMMGEREQPRQ
VDEIISAGSWGYRRRARLGLNYQPRTQTLQMGFRKASDKALVDIHHCPVLAPRLEALLEP
LRQCLSELSIVNRLGHVELVLADGGPLMVLRHLAPLSKDDRQKLEQFSHSHEVALFLAPD
SDSLESLADEEPWYHSDGLRLTFSPRDFIQVNDAVNQQMVARAIEWLEVQPEDRVLDLFC
GMGNFTLPLAKRAAAVVGVEGVAALVAKGEYNAQRNALKNVTFFHENLEDDVTRQPWAQQ
GFTKILLDPARAGAAGVMQHVIKLAPSRVVYVSCNPTTLARDSETLLAAGYHIKRLAMLD
MFPHTGHLESMALFERN
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcgcaattctactctgcaaagcgacgcgatacgaatcgtgaattacttaccgtgacc
gtaaccgacctcgatccattcggtcagggcgtcgcgcgccacaaaggcaaagcgctcttt
attcgtggcgcactgcctggcgaacaggttgaggttcgcattaccgaagataagcgtagc
tacgctcaggctgaggtaaagcgccgtttaaacgacagcccggaaagggtgaagccacgt
tgcccgcattttggggtttgcggcggctgtcagcagcagcacgcgagcgtggcgctgcag
caggaagcaaaatctaaggccctggggcgcatgatgggcgagcgcgaacagcctcgtcag
gtggatgaaattatttctgccgggtcatggggataccgccgtcgtgcacggctggggttg
aattatcagccccgcacgcaaaccttacagatgggttttcgcaaggcgagcgacaaggcg
ctggtggatattcatcattgccccgtgctggcgccccggcttgaagcattactggaacct
ttacgccagtgcttgtctgaattaagtatcgtgaaccggttagggcacgtggagctggtc
ctggccgacggtgggccgctgatggtgctgcgccatttggctccgctcagcaaggatgac
cgacaaaaactggaacagttttcgcattcccatgaggtggcgttattccttgccccggac
agcgacagcctggaatccctggccgacgaagagccctggtatcattcagacgggctacgc
ttaacctttagcccacgagatttcatccaggttaacgacgcggtgaaccagcaaatggtg
gcgcgggcgatcgagtggttggaggtgcagcctgaggatcgggtgctagatttgttctgc
ggaatggggaattttaccctgccgttggcaaaacgagccgccgcggtcgtgggggtcgaa
ggcgttgctgcgctggtggcgaaaggtgaatataatgctcaacgtaatgcgctgaaaaac
gtgacattcttccatgaaaacctggaagatgacgtgacgcggcagccctgggcgcaacaa
ggatttacgaaaatattgctcgacccggcgcgtgcgggtgcggcgggggttatgcagcac
gtcatcaaactggcgccgagccgcgtggtgtacgtttcctgcaaccccaccacgcttgcg
cgtgacagtgaaacgttgctggccgccgggtaccacattaaacgactggccatgctcgat
atgttcccccacaccgggcatctggagtctatggcgctctttgagcgtaattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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