KEGG   Cedecea neteri ND14a: LH86_01300
Entry
LH86_01300        CDS       T03337                                 
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
cen  Cedecea neteri ND14a
Pathway
cen03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LH86_01300 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cen03400]
    LH86_01300 (recB)
Enzymes [BR:cen01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     LH86_01300 (recB)
DNA repair and recombination proteins [BR:cen03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LH86_01300 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_22 AAA_30 AAA_11 AAA_25 BscB_a-b
Other DBs
NCBI-ProteinID: AIR63750
Position
complement(262617..266162)
AA seq 1181 aa
MTDVTAQPLDPLSLPLFGERLIEASAGTGKTFTIAALYLRLLLGLGGENAFPRPLGVEEL
LVVTFTEAATEELRGRIRANIHELRIACIRNRTKNPLIQNLLVQITDKQLAARTLLLAEQ
QMDEAAIFTIHGFCQRMLSLNAFESGMLFEQQLLEDESLLRRHACADFWRRHCYPLPKPV
AQAMSEEWSGPEALLRDINSWLQGEQPRLKQPPADDETLLARHEKIISAIDAVKAQWREA
AGELSSLISDSGVDKRSYSSKHLPNWLEIVGQWAQLETTGYQLPEALAKFAQSTLEEKTK
KGEVPRHSLFTAIDALLAEPLTLRDLVIARAMAEIRYIVQQEKRRRGELGFDDMLSRLDE
SLHQPGGDALATAIRSRFPVAMIDEFQDTDPQQYRIFRRLYIKQQGTALLLIGDPKQAIY
AFRGADIFTYMKARQEVSAHYTLDTNWRSSPSMIHGVNTLFQQVENPFLFRQIPFLPVKS
APRNGGLRFTIGGESQAAVKMWLQPGDGVGVSDYQQAMASQCARQIRDWLTAGQRGDALL
WQGDDARPLRASDMTILVRSRGEAAIVRDALGALNIPSVYLSNRDSVFATVEARELLWVL
QAVLTPEIETAMRSAIATAMLGLDAQAIESLNNDELAWDSLVDEFFGYREQWLKRGVMPM
LRALIEARNIAENLLATPGGERRLTDILHISELLQEASAEMESEHALVRWLAQRIAEPDS
NASSQQLRLESDKHLVQVVTIHKSKGLEYPLVWLPFVANYRPQNSGLYHDRTTFTSLLDL
SNDAESLGLAEEERLAEDLRLLYVALTRSVWHCSLGVAPLFRGSRAKKGSSDLHLSALGY
LLQKGEALDAEGLRQALDGLVSEAIDVETLSSGDDTPWQPRPDALPELAARQLRRRITDN
WRVTSYSGLQQHGSSRVLDLVPRLDVDAVGEVPEQSEPLLTPHTFPRGASPGTFLHSLFE
EVDFTQPVQPEEIEKHLLANGFGGEWGPVVSRWLEAVLAAPLNDTGVALNLLSAKERQVE
LEFYLPIDNELQAPALDALIRHYDPLSAGCPPLDFRQVKGMLKGFIDLVFRWQGRYYLLD
YKSNWLGEDSSAYTQEAMAKAMQSHRYDLQYQLYTLALHRYLRHRMAGYDYQQHFGGVIY
LFLRGVEQGKPEQGIVSTRPDVRLVEAMDALFAGAAEEIPL
NT seq 3546 nt   +upstreamnt  +downstreamnt
atgaccgatgtaaccgcgcagccccttgatcctttaagtttgccgttgttcggcgaacgg
ttgatagaagcttccgcggggaccggtaagacctttaccattgccgcgctttatttgcgg
ctgctgttgggcttagggggagagaatgctttcccccgtccgctgggggttgaagaactg
ctggtggtgactttcaccgaagcggccaccgaagagctgcgtggccgtattcgggcgaat
atccacgaattgcgcatcgcctgtattcgtaaccgcaccaaaaacccactgatacagaac
ttgcttgtccagattacggacaaacagctcgctgcccgaaccttgctgttagccgaacag
cagatggatgaagcggctattttcactatccacggcttttgccagcggatgctcagcctc
aatgcttttgagtccgggatgcttttcgagcagcagctactcgaggatgaatccttgctg
cgccgccatgcctgtgctgatttctggcggcgtcactgctacccgctgccaaaacctgtc
gcgcaggcgatgagtgaggagtggtcggggccggaggcgcttttaagggatatcaatagc
tggcttcagggcgaacagccccggttgaaacagcccccggcggatgacgaaacgctgctg
gctcgccatgaaaagattatttctgccattgatgcagtaaaagcccaatggcgcgaggcc
gcgggggagctgtcaagcctgattagtgattccggggtggataaacgcagctacagcagt
aaacatttgccgaactggctggagattgttggccagtgggcgcagctggaaaccaccggt
tatcagctccctgaggcgctggcgaagtttgcgcaaagcacgctggaagagaaaaccaaa
aaaggcgaagtgccccggcatagcctgttcaccgccatcgacgcattgcttgcagagccg
ctaacgctgcgtgacctggtgattgccagagcgatggcggaaattcgctatattgttcag
caagaaaagcgccgccgcggcgaactgggctttgacgatatgctgagtcgactcgatgag
tctctgcatcagcccggtggcgacgccttagcgacggcgatccgcagtcgtttcccggtg
gcgatgatcgatgaattccaggataccgacccgcagcagtaccgcatcttccgccggctg
tatatcaagcagcagggcaccgcgctgttgctgattggtgaccccaagcaggctatttac
gctttccgcggcgccgatatttttacctacatgaaggcgcgtcaggaagttagtgcccac
tacacgctggacactaactggcgctcgtctccctcgatgatccacggcgtaaacacgctg
ttccagcaggttgagaatccgttcttattccgccagatcccattcctgccggtcaaatca
gcgccccgtaacggtgggctgcggtttaccatcgggggggaaagccaggcggcggtgaaa
atgtggcttcagccgggggatggcgtcggtgtaagtgattaccaacaagcgatggcatcg
cagtgtgcccggcaaattcgcgactggctcaccgccggacagcgtggggatgcgctgctt
tggcagggggatgacgcccggccgctcagggcatcggatatgacgattctggttcgtagc
cgtggagaagcggccatcgtacgtgatgcgctgggcgcgctgaatattccttcggtgtat
ctctctaaccgcgattccgtgtttgctaccgttgaagcgcgtgagctgctgtgggtgtta
caggccgtattaacgcctgaaattgagacggctatgcgcagcgccattgcgacagccatg
ttagggctggatgcccaggctatcgagtctctgaacaacgacgaactggcctgggatagc
ctggttgacgaattcttcggctaccgcgaacagtggcttaagcggggcgtgatgcccatg
ttaagagccttaatcgaagcgagaaatatagctgaaaacctgctggccacgccgggtgga
gagcgcaggctgacagatattctgcacatcagcgagctgttgcaggaagcctcggcagaa
atggagagcgagcatgcgctggtgcgctggctggcgcagcggattgccgagccggacagc
aacgcttccagtcagcagttgaggctcgaaagcgataaacatctggtgcaggttgtgacc
atccacaaatctaaagggctggagtatccgctggtctggctgccgtttgtggccaactat
cgcccgcaaaacagcggtctgtatcacgaccggaccacttttacctcacttctggattta
agcaacgatgcggaaagcctggggctggccgaagaagaacgtctggcggaagacttgcgt
ctgctctatgtggcattgacccgctccgtctggcactgcagcctgggcgttgcgccgttg
ttccgaggttccagggcaaaaaaaggcagcagcgaccttcacctcagtgcgctgggctat
ttgctgcaaaaaggagaagcgctcgatgcagagggactgcgccaggcgcttgatggtctg
gtaagcgaggccatcgacgttgaaacactctcttccggggacgataccccgtggcagccg
cggcccgatgctttgcctgagcttgccgcccgccagctcaggcgtcgaatcaccgataac
tggcgcgtgaccagttattctggtctgcagcagcacggcagcagccgggttctggattta
gtgccacgcctggatgttgacgcagtcggggaggtccccgaacaaagtgagccgttactt
acgccgcatactttccctcgcggggcctcgccgggcaccttcttgcacagccttttcgaa
gaggttgattttactcagccagtacagcctgaagagatagaaaaacacctgcttgccaat
gggtttggcggcgagtgggggccggtggtaagccgctggctggaagcggtgcttgctgcg
ccgctcaatgataccggcgttgccctgaacctgctttctgcgaaggaaagacaggtggag
ctggaattttatttacctatcgacaatgagctccaggccccggcgttagatgcgctaatt
cgtcattacgacccgctgtctgctggttgtccgcctttggatttccgtcaggtgaagggg
atgctgaaagggtttatcgacctggtgttccgctggcaggggcgctactacctgctggac
tacaaatctaactggctgggtgaagacagcagtgcctacacccaggaggcgatggcgaag
gcgatgcaatcccaccgctacgatttgcagtaccagctctacacgctggcgctgcatcgc
tacctgcgccaccgtatggccgggtatgactaccagcagcactttggtggggtcatttat
ctgttcctgcgcggcgtggagcaaggtaagcccgagcagggtattgtttcaacgcgaccg
gacgtcaggctggttgaagcaatggatgcgctgttcgccggggcagcagaggagatccca
ctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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