KEGG   Cedecea neteri ND14a: LH86_17885
Entry
LH86_17885        CDS       T03337                                 
Symbol
yebU
Name
(GenBank) RNA methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
cen  Cedecea neteri ND14a
Brite
KEGG Orthology (KO) [BR:cen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cen03009]
    LH86_17885 (yebU)
Enzymes [BR:cen01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     LH86_17885 (yebU)
Ribosome biogenesis [BR:cen03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LH86_17885 (yebU)
SSDB
Motif
Pfam: Methyltr_RsmB-F YebU_pre-PUA_dom Methyltr_RsmF_N Methyltranf_PUA Methyltransf_31 Methyltransf_25 PCMT FtsJ TRM
Other DBs
NCBI-ProteinID: AIR66887
Position
3778874..3780322
AA seq 482 aa
MAQSTAVYLPQPFLDAIRDALPADQTLESFIEYCQQPLRRSLRVNTLKISVADFLTLVAP
YNWRLTPVPWCNEGFWIEREDEESLPLGSTAEHLSGLFYIQEASSMLPVAALFADGNQPQ
RVMDVAAAPGSKTTQIAARMNNAGAILANEYSASRVKVLHANISRCGISNVALTHFDGRV
FGAALPESFDAILLDAPCSGEGVVRKDPDALRNWSPESTAEIAGTQRELIESAFHALRPG
GTLVYSTCTLNRQENQDVCQWLLDTWPDAGEIAPLNELFPEADRALTPEGFLHVFPQIYD
CEGFFVARLRKTASIEPLPAPGYKVGKFPFAPMKGKAAVELTAAAAKSGLTWGNELSLWQ
RDKEIWLFPTEIEPLIGKVRFSRIGLKLAEQHNKGFRWQHEAVVSLVKSDNPLCFPLTEA
EAEEWYRGRDIYPEVTPSRDEVIVTFQGQPLGLARKVGSRLKNSYPRELVRDGKLFAAPQ
AG
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggctcaatcgactgccgtttatcttcctcaaccttttctcgacgcgattcgtgacgca
ctccccgccgaccagacactggaaagctttatcgaatactgccagcagccgctgcgccgc
agcctgcgcgtcaatacgctgaagatatccgtggctgactttctgacgctcgtcgcgcct
tataactggcgtttaacgccggtaccgtggtgcaacgagggtttctggattgaacgtgaa
gatgaagaaagcctgccgctgggcagcaccgcagagcatttgagcggcctgttctatatt
caggaagccagttcaatgctgcccgttgccgcgctgtttgctgacggcaaccagccgcag
cgagtgatggacgttgccgccgcaccgggctcaaaaacaacccagattgccgcccgcatg
aataacgccggcgcaattcttgccaatgaatattccgccagccgggtaaaagtcctgcat
gccaacatcagccgctgtgggatcagcaacgtggcgctgacgcattttgatggacgcgta
ttcggtgccgccctgccggaatccttcgacgccattctgctggacgccccctgctccggt
gaaggtgtggtgcgaaaagatcctgatgcgctgcgcaactggtcgcctgaaagtacagct
gaaattgccggaacccagcgcgaattgatcgagagtgcttttcatgcactcagacctggc
gggacgctggtctactcgacctgcacgctgaatcgccaggaaaaccaggatgtctgccaa
tggctgctggatacctggccggacgcgggagaaatagcccccctgaatgaacttttcccg
gaagccgatcgtgcgctgactccggaaggtttcctgcacgtattcccgcagatttatgac
tgtgaaggcttcttcgttgcgcgcttgcgcaaaacggcctctatcgaaccgctgccggct
ccgggctataaagtcgggaaattccccttcgcgccgatgaaaggcaaagccgctgtcgaa
ctgaccgccgcggcggcaaaatcgggcctgacctggggcaatgagctgagcttatggcag
cgggacaaagaaatctggctgttcccaactgagattgagccgcttatcggtaaagtgcgt
ttttctcgcattggcctgaagctcgccgaacagcataacaaaggtttccgctggcagcat
gaagccgtggtttctctggtcaaaagtgacaacccactttgcttcccgctgaccgaggcc
gaagccgaggagtggtatcgtgggcgggatatctatccagaagtgacaccgtcacgagat
gaagtgattgtcacttttcaggggcaaccgctcggcctggcgcgcaaagttggctcacgc
cttaagaacagctatccaagggaattagtgcgcgacggcaagcttttcgccgccccgcag
gctggctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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