KEGG   Crinalium epipsammum: Cri9333_2744
Entry
Cri9333_2744      CDS       T02373                                 
Name
(GenBank) RNA polymerase, sigma subunit, RpsC/SigC
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
cep  Crinalium epipsammum
Brite
KEGG Orthology (KO) [BR:cep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cep03021]
    Cri9333_2744
Transcription machinery [BR:cep03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Cri9333_2744
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 LexA_DNA_bind HTH_28 NPV_P10
Other DBs
NCBI-ProteinID: AFZ13595
UniProt: K9W2G5
Position
complement(3068401..3069669)
AA seq 422 aa
MPATSFNAKTAESHQLSTDTDSEDLISDDSEPTLDELVEIELGGTETGKPINGGIKHTTD
LVRLYLQEIGRVRLLGRDEEVSEAQKVQRYIRLLELRTTATSQENLDTSQVECLQLYIRL
IEAHDRLASQLGHRPSLERWAAEAHIALSELKPTLVAGKRSWAEVAGLTVPDLEQIQKEG
LQAKEHMIKANLRLVVSVAKKYQNRGLELLDLIQEGTMGLERAVEKFDPTKGYRFSTYAY
WWIRQGITRAIATQSRTIRLPVHITEKLNKIKKVQRQLSQTQGHTPTIEEIAAALEMTPP
QVREVLLRVPRSVSLEIKVGKEKDTELGDLLEAEDISPEELLMREALQIELLKLLADLTS
RERDVISMRFGMVDGNVYSLSEIGRALDLSRERVRQIESKALQKLRQPKRRNRVRDYLET
LS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgccagccacttcttttaacgccaaaactgctgaatcccatcaactatccaccgacacg
gacagtgaagatctgatcagcgacgattctgagccaacacttgatgagctagttgagatt
gagctaggaggtacagagactggtaagcctatcaatggcggtatcaaacatactacagat
ttagtacggttatacctccaagaaattggcagggtgcgtttactgggacgagatgaagaa
gtctcggaggctcaaaaagttcagcgatatatacggttattagagttgcggacaacagca
actagccaagaaaatctcgatacatctcaagttgaatgtttacagttatatatcaggttg
attgaagctcatgatcgtctcgcttctcagttagggcatcgtccttctttagaacgatgg
gcagcagaagctcatattgctttgtctgaacttaagccgactttggttgctggtaagcgt
agttgggcagaagttgctggtttaactgtgccagaccttgagcagattcagaaagaaggt
ctgcaagccaaagaacatatgatcaaggcaaatctgcgcttagtcgtgtcggtagccaag
aagtatcaaaatcgaggtttagaactactggacttaatccaggaaggcacaatggggcta
gaaagggctgttgagaagtttgatcctactaagggatacagattcagcacctatgcttac
tggtggattcgtcagggaataactagagcgatcgccactcaaagtcgcactatccgccta
cctgttcacattactgaaaaactcaataaaattaaaaaagttcaacgccaactttctcaa
actcaaggacatactcccacaattgaggagatagctgctgcgttagaaatgacaccgcca
caggtgagagaagttttactgcgcgtacctagatctgtctctttagaaattaaagtcggt
aaggaaaaagacaccgaactcggagacttactagaagcagaagacatttctcccgaagaa
ctgttgatgcgagaagcattacaaatagagttgctcaaactgttagccgatctcaccagt
cgtgagcgtgatgtcatcagtatgcggtttggcatggtagatggtaatgtctactcgcta
tcagaaattggtcgcgctctcgacttgtcgcgcgaacgagttcgtcaaatcgaatccaaa
gctttgcaaaagctacgccaaccaaagcgccgcaatcgcgtgcgggattatttagaaact
ttaagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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