KEGG   Cyanobacterium endosymbiont of Rhopalodia gibberula: RGRSB_1253
Entry
RGRSB_1253        CDS       T05747                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
cer  Cyanobacterium endosymbiont of Rhopalodia gibberula
Pathway
cer00470  D-Amino acid metabolism
cer00550  Peptidoglycan biosynthesis
cer01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cer00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RGRSB_1253 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RGRSB_1253 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:cer01011]
    RGRSB_1253 (murD)
Enzymes [BR:cer01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     RGRSB_1253 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:cer01011]
 Precursor biosynthesis
  Amino acid ligase
   RGRSB_1253 (murD)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C MurD-like_N Rep_fac_C Pyr_redox DAO
Other DBs
NCBI-ProteinID: BBA79712
UniProt: A0A2Z5SXI6
Position
1958077..1959429
AA seq 450 aa
MAIAYIIGLGRSGIAAARVLKTDGWEVVLSDRANSLPLQQTRRILEQEGITVKLGHELTL
ITTDSPDLIVVSPGVPFDIPFLVEARAHGIDVIGELELAWRYLHRFPWVGITGTNGKTTT
TALTASIFKTSGLNAPSCGNIGHAACELVLSLEKFDWIIAEVSSYQGESLRRLAPKIGIW
TTFTADHLDRHKTLDNYYAIKASILHRCEYQILNGDDPHLHQVGLNQWANAYWTTTKGKD
HLLCTPSKGIYVQDNWIVAFGELIAPLNLFKMVGSHNQQNLLMAVGAARLAGIEKGAIAQ
AIPEFKGVPHRLELICNVRGIDFINDSKATNYDAAEVGLVSVKSPVILVAGGKIKEGDND
RWIKQIKKKVSTVLLIGEAAEIFSQKLQESGYEAYEIVETLENAVKRGLELGQKQKVKVV
LFSPACASFDQYQSFEHRGDHFRQLCQELS
NT seq 1353 nt   +upstreamnt  +downstreamnt
atggccattgcttatattattggactaggaagatcaggaattgccgcagctagagtactg
aaaacagacggatgggaagtagttctgagtgatcgcgctaactctttacccctacaacaa
actcgacggatcttagaacaagaagggattacggttaaattaggacatgaactaacgttg
ataacgacagactcacctgacttaattgtagtcagtccaggggttccttttgatattcct
tttttggtagaagcgcgcgctcacggtattgatgttattggagaattggaattagcttgg
cgatatttacacaggtttccttgggtaggaatcacgggaaccaatgggaaaactaccacc
acggccctaacagcgtcaatttttaaaacatcaggactcaatgccccctcttgcggcaac
attggtcatgctgcttgcgagcttgttctatctttagagaaatttgattggattatagct
gaagttagtagttatcaaggagagtctttgagaagattagccccaaaaattggtatttgg
acaacttttacggctgatcatcttgaccgtcataaaaccctagataattattatgctatc
aaagcatctatcctacatcggtgtgaatatcaaatccttaatggagatgatcctcattta
catcaagtgggattaaatcagtgggccaatgcctattggacgactactaaaggaaaggat
catttactctgcactccttctaaggggatctacgttcaagataattggatagtcgctttt
ggggaattaatcgcgcctttgaatctctttaaaatggtggggtctcacaatcaacaaaac
ttattaatggcagtaggagcagcacgattagcaggaattgaaaaaggggcgattgctcag
gcaattcctgaatttaaaggagttcctcatcgcctagaattaatttgtaatgtgcgggga
attgactttattaatgatagtaaggcaacgaattatgatgcagcagaagttggcttagtt
tccgtcaaatctccagtaattttagtggcggggggaaaaataaaagaaggggacaatgac
cgttggattaaacaaattaaaaaaaaagtttctacagttttgttaattggagaggcagcc
gaaatattttctcaaaagttacaagagtcgggatatgaagcttatgaaatagtagaaact
ctagaaaatgctgttaaacgaggattagaattaggacagaaacagaaggtgaaagtggta
ttattttctccggcttgcgctagttttgatcagtatcaaagttttgaacatcgtggtgat
cattttcgacaactctgtcaagaattaagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system