KEGG   Canis lupus familiaris (dog): 100687767
Entry
100687767         CDS       T01007                                 
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
  KO
K06823  collagen type XVIII alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100687767 (COL18A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cfa04147]
    100687767 (COL18A1)
   00535 Proteoglycans [BR:cfa00535]
    100687767 (COL18A1)
   00536 Glycosaminoglycan binding proteins [BR:cfa00536]
    100687767 (COL18A1)
Exosome [BR:cfa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100687767 (COL18A1)
Proteoglycans [BR:cfa00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   100687767 (COL18A1)
Glycosaminoglycan binding proteins [BR:cfa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100687767 (COL18A1)
SSDB
Motif
Pfam: Endostatin Collagen DUF959 Collagen_trimer Laminin_G_3
Other DBs
NCBI-GeneID: 100687767
NCBI-ProteinID: XP_038317720
VGNC: 49781
Position
31:38143980..38184998
AA seq 1487 aa
MARHPGRCLLLLLLLTCCPAAAQVDLLSLNWLWSTRTAGPTAEPVSEAPGSPHVQPRDET
GTPVTPQPGPTEQGNAPASPEPPLRGLETDEHAASAAPSAPPAGPDPKEEKEENIAGVGA
KILNVAQGIRSFVQLWDDTTRPESSSTAGTPAPVTPTSPLALPGPSRPPPENGTALWLGS
TDAPRVEASTLPAPTRLPPSLDRPRAALREPSGPPPSPESRGSEVGLLQLLGEPPPQQVT
QVDDPDVGPAFVFGPDANSGQVARYHVPSPFFRDFSLLMHVRPATEGPGVLFAITDAAQA
VVSVGVKLSGVRDGQQHVQLLYTEPGAARTRTAASFRLPAFTGQWTRLALSVDGATVALF
VDCELFQRVPLERSPGGLQLEPGAGLFVAQAGGADPDKFQGMIAELRVRGDPHVSPLHCL
EEDDDDSGGVSGDFGSGLEDDREPSGLLPKAELPEAPPVTSPPLTGGRDVEDSRMEEIEE
EATASPLGARTLPGSATVTAESAQRLGGSLQEAPTGPAAHNPEAWPGPGPQGPPGPPGPP
GKDGTPGRDGEPGDPGEDGRPGDPGPQGFPGTPGDVGPKGEKGDPGVGPRGPPGPQGPPG
PPGPSFRHDKLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSSDV
PGPAGLPGVPGRDGPPGLPGAPGPPGPPGKEGGPGKPGPKGSPGDAGAPGPKGSKGDPGP
IGVPGESGLAGPPGPAGPPGPPGPPGPPGPGLAAGFVDMEGSGEPFWSTAHGASGPQGPP
GLPGVKGDPGIVGPPGAKGEVGADGPPGFPGLPGREGTAGAQGPKGEKGTQGEKGEPGRD
GVGQPGLPGPPGPPGPVVYVSEQERAATGVPGPEGRPGHAGFPGPAGPKGDLGSKGQWGP
PGPKGEKGEPGPAFSPDGSMLAPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPG
MNGLKGEKGEPGQASAGFGMTGPPGPPGPPGPPGPPGTPVYDSNAFMEPGHPGPPGLPGH
QGPSGPKGDKGDVGPPGPPGQFPFDLLQLGAEMKGEKGDRGDAGQKGERGEPGGGGFFGS
SVPGPPGPPGYPGIPGPKGESVQGHPGPPGPQGPPGIGHEGRRGPPGPPGPPGPPGPPSF
PGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLDKVPDVPEGWLMFVAER
EELYVRVRNGFRKVLLEARVPLPRGTDNEVAALQPPVVQLHEGNPYPRREPTHATARPWR
ADDILASPPRLLDPQPYPGAPHHGSYVHFQPARPTGGPVHTHTHTHQDFQPVLHLVALNS
PQPGGMRGIRGADFQCFQQARAAGLAGTFRAFLSSRLQDLYSIVRRADRTGVPVVNLRDE
VLFPSWEALFSGSEGQLKPGARIFSFDGRDVLQHPAWPRKSVWHGSDPSGRRLTDSYCET
WRTEAPAATGQASSLLAGRLLEQEAASCRHAFVVPCIENSVMTSFSK
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggctcgccaccccggccgctgcctgctgctgctgctgctgctcacctgttgccctgcg
gccgcccaggttgacctactgagcctgaactggctgtggtccactaggaccgccgggccc
acggccgaaccggtgtcggaggccccggggagcccacatgtgcagcccagagacgagacc
ggcacgcctgtgaccccccagcccggccccacggagcagggcaatgcccccgccagcccg
gagccgcctctgcgggggctggagaccgacgagcacgcggcctccgccgcaccctctgcc
ccccccgcgggcccggacccgaaggaggagaaggaggagaacatcgccggcgtgggagcc
aagatcctgaacgtggctcagggcatccggagcttcgtccagctgtgggacgacaccacg
cgcccggagagctccagcacggccgggacgcccgcccccgtgacccccaccagccccctc
gccctcccggggccctcccggccccccccggagaacgggacggctctctggctgggcagc
acggatgccccgcgcgtggaggccagcaccctgccggcgcccacccggctgcccccctcc
ctggacaggccccgggcagcgctcagggagccctcggggccgccgccttctccagagagc
cggggctcggaggtggggctcctgcagctgctgggagagcccccgccccagcaggtcacc
caggtggacgaccccgacgtggggccggccttcgtcttcggcccggacgccaacagcggc
caggtggcccggtaccacgtccccagcccgttcttccgtgacttctcgctgctcatgcac
gtgcggccggccaccgagggcccgggggtgctgtttgccatcacggacgcggcccaggcg
gtggtctccgtgggcgtgaagctgtcgggcgtgcgtgacgggcagcagcacgtccagctc
ctgtacacggagcccggggccgcccggacccgcacggccgccagcttccgcctgcccgcc
ttcaccggccagtggacgcgcttggcgctcagcgtggacggcgcgacggtggcgctgttc
gtggactgcgagttgttccagagggtgcccctggagcgctccccggggggcctgcagctg
gagcccggcgccggcctgttcgtggcccaggcgggaggagcggaccccgacaagttccag
gggatgatcgcggagctgagggtgcgtggggacccgcacgtgagccccctgcactgcctg
gaggaggacgacgacgacagcggcggggtgtccggagacttcgggagcgggctggaggac
gaccgggagccgtcgggtctgctccccaaagccgagctccccgaggctcccccggtcact
tctccgcccttgactggaggcagggacgtggaagattccagaatggaagaaatcgaggaa
gaagccacggcgtccccgttgggagctcggaccctccccggctcggctacagtcactgca
gagagcgcccaacgccttgggggcagcctgcaggaggctcctacaggccctgcggcgcac
aaccctgaagcatggccgggacccgggccacagggccccccgggccccccagggccgccg
gggaaggatggcacccctggaagggacggtgagccgggggatcccggtgaggacgggagg
ccgggtgaccctgggccgcagggcttccccggaaccccgggagacgtgggccccaagggc
gagaagggcgaccctggggtcgggccaagaggacccccaggaccccaagggcctccaggg
ccaccaggaccctccttcagacacgacaagctgaccttcattgacatggagggttccggg
ttcggcggtgacctggagagcctccgaggccccagaggcttccccggcccccctgggccc
cccggcgtcccaggcctgcccggagagccaggccgcttcgggatgaacagctcggacgtc
ccaggccccgcaggccttcctggtgtccccgggcgggacgggccccctggacttcccggc
gccccgggaccgccaggccctccggggaaagaaggaggaccagggaagcccggcccgaaa
ggcagccccggtgacgcgggcgccccaggacctaagggaagcaagggtgaccccggcccc
atcggcgttccaggggagagcggcttggcaggaccccccgggccggctggaccgccaggg
ccccccggacccccggggccaccgggaccaggactggccgcggggtttgttgacatggaa
ggctcgggggaacccttctggtcgacggcgcacggagccagcgggccgcagggaccgcca
ggcctgcccggggtcaagggggaccctgggatagtgggaccaccgggcgccaagggagaa
gtcggcgcagatgggcctcccgggttccccggcctccctggcagagagggcacggccgga
gcgcagggacccaaaggagaaaaagggacccagggagagaaaggcgagccagggagggac
ggagtggggcagcctgggctccccggaccccccggacccccggggcccgtcgtctacgtg
tcagagcaggagagagcggcgacaggcgtgccgggacccgagggccggccgggacacgcg
ggctttcctggtccggccgggccgaagggagatctgggctccaaaggccaatggggcccc
ccagggcccaagggcgagaagggcgagccgggcccggcgttcagccccgacggcagcatg
ctggcccccgcccagaagggggccaagggagaacccggcttccgaggccccccgggtccc
tacgggcggccggggcacaagggagagatcggcttccctgggcggccgggtcgccccggg
atgaacggactgaagggggagaaaggggagccaggacaggccagcgccggcttcggtatg
acgggtccacccggtcccccagggcctccggggcccccaggccctcctgggactcccgtc
tatgacagcaacgcatttatggagcctggccaccccggacctccaggattgccagggcac
cagggaccttctggaccaaagggtgacaaaggagacgtgggccctccaggaccaccaggc
cagttccccttcgacctcctccagctcggggctgagatgaagggggagaagggcgaccga
ggcgacgccgggcagaagggcgagcgcggtgagcccggggggggcgggttcttcggctca
agcgtgcccggcccccccggccccccgggctaccccggcatcccgggtcccaagggagag
agcgttcagggccatcccggcccccctggacctcagggtccccctggcatcggccatgag
gggcgtcgggggcctcccgggccccccggcccccccgggcccccaggacccccttccttt
cctggcccttacaggcagactatcagtgtccccggcccccccggaccccccgggcctccc
ggcccccctggaaccatgggcacgtcctcagggcaggtgcgcatctgggccacgtaccag
acgatgctggacaaggtgccggacgtgccggagggctggctcatgtttgtggccgagagg
gaggagctgtacgtccgggtccggaacgggttccggaaggttctgctggaggcgcgggtg
ccactcccacgcgggacggacaacgaagtggccgccttgcagccccccgtggtgcagctg
cacgagggcaacccatacccccggcgggagcccacccacgccacggcgcggccctggcgg
gcagatgacatcctggccagccccccgcgcctgctggacccccagccctaccccggggcc
ccgcaccacggctcctacgtgcacttccagccggctcgccccactggtgggcctgtccac
acccacacccacacccaccaggacttccagccggtgctgcacctggtggccctgaacagc
ccgcagccgggcggcatgcgaggcatccggggagcggacttccagtgcttccagcaggcg
cgcgccgcggggctggccggcaccttccgggccttcctgtcgtcgcggctgcaggacctc
tacagcatcgtgcgccgcgccgaccgcaccggggtgcccgtcgtcaacctcagggacgag
gtgctcttccccagctgggaggccttattctcgggctccgagggccagctgaagcccggg
gcccgcatcttctctttcgacggcagagatgtcctgcagcaccccgcctggccccggaag
agcgtgtggcacggctccgaccccagcgggcgccgcctgaccgacagctactgcgagacg
tggcggacggaggccccggcggccaccgggcaggcgtcgtcgctgctggcgggcaggctg
ctggagcaggaggccgcgagctgccgccacgccttcgtggtgccctgcatcgagaacagc
gtcatgacctccttctccaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (150)   
   KEGG ORTHOLOGY (1)   
   RefGene (145)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (10)   
   RefSeq(nuc) (10)   
Protein domain (5)   
   Pfam (5)   
All databases (181)   

Download RDF
DBGET integrated database retrieval system