KEGG   Canis lupus familiaris (dog): 403651
Entry
403651            CDS       T01007                                 
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain precursor
  KO
K06236  collagen type I alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04151  PI3K-Akt signaling pathway
cfa04510  Focal adhesion
cfa04512  ECM-receptor interaction
cfa04611  Platelet activation
cfa04820  Cytoskeleton in muscle cells
cfa04926  Relaxin signaling pathway
cfa04933  AGE-RAGE signaling pathway in diabetic complications
cfa04974  Protein digestion and absorption
cfa05146  Amoebiasis
cfa05165  Human papillomavirus infection
cfa05205  Proteoglycans in cancer
cfa05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    403651 (COL1A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    403651 (COL1A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    403651 (COL1A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    403651 (COL1A1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    403651 (COL1A1)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    403651 (COL1A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    403651 (COL1A1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    403651 (COL1A1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    403651 (COL1A1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    403651 (COL1A1)
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    403651 (COL1A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    403651 (COL1A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cfa00536]
    403651 (COL1A1)
Glycosaminoglycan binding proteins [BR:cfa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   403651 (COL1A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 403651
NCBI-ProteinID: NP_001003090
Ensembl: ENSCAFG00000017018
VGNC: 39464
UniProt: Q9XSJ7
Position
9:complement(25576913..25592983)
AA seq 1460 aa
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD
NGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETTGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPS
GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER
GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR
GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE
GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS
GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP
GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP
GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP
GAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP
GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP
GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA
GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA
GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE
GGKGARGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR
GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHV
WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL
KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP
LDVGAPDQEFGMDIGPVCFL
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac
aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggcgcc
caagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctaccgac
caagaaaccacaggagtcgagggacccaaaggagacaccggcccccgaggtccaagggga
cctgccgggccccctggccgagatggcatccccggacagcctggacttcccggaccccct
ggacctcccggaccccctggaccccctggcctcggaggaaactttgctccccaaatgtct
tatggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttct
ggtcctcgtggtctccctggcccccctggcgcacctggtcctcaaggtttccaaggcccc
cctggtgaacctggcgagcctggagcctcaggtcccatgggtccccgtggtccccctggc
ccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgagcgt
gggcctcctgggcctcagggtgctcggggattgcctggaacagctggccttcctggaatg
aagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggt
cccaagggtgagcctggtagccccggtgaaaatggagctcctggccagatgggcccccgt
ggtctgcccggtgaaagaggtcgccctggagcccctggccctgccggtgctcgtggaaac
gatggtgctactggtgctgctgggccccctggtcccactggccccgctggtcctcctggc
ttccccggtgctgttggtgctaagggtgaagctggtccccaaggagcccgtggctctgaa
ggtccccagggcgtgcgtggtgagcccggcccccctggccctgctggtgctgccggccct
gccggaaaccccggtgctgatggacagcctggtgctaaaggtgctaacggcgctcctggc
attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc
ggtcctcctggtcccaagggtaacagcggtgaacctggtgctcccggaaacaaaggagac
actggtgccaagggagagcccggccccactggtattcaaggtccccctggccctgctggg
gaagaaggaaagcgaggagcccgaggtgaacctggacccactggcctgcccggaccccct
ggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggtgtcgctggtccc
aagggtcccgctggtgaacgtggttctcctggtcccgctgggcccaaaggttctcctggt
gaagctggtcgccctggtgaagctggtctgcctggtgccaagggtctgactggaagtcct
ggcagccccggtccagatggcaaaactggcccccctggtcccgctggtcaggatggtcgt
cccggacccccaggcccccctggtgcccgtggtcaagctggtgtgatgggattccctggg
cctaaaggtgccgctggagagcctggcaaggctggagagcgtggtgtccctggcccccct
ggtgctgttggtcctgctggcaaagatggagaagcaggagctcaggggccccctggccct
gctggccccgctggcgagagaggtgaacaaggtcctgctggctcccccggattccagggt
ctccctggccctgctggtcctcccggcgaagcaggcaaacctggtgaacagggtgttcct
ggcgaccttggtgcccccggcccctctggagcaagaggcgagagaggctttcctggtgaa
cgtggtgtgcaaggtccccccggtcctgcaggtccccgaggagccaacggtgcccctggc
aatgatggtgctaagggtgatgctggtgcccctggagccccaggtagccagggcgctcct
ggccttcagggaatgcctggtgaacgaggtgcagctggtcttcctggccctaagggtgac
agaggtgatgccggtcccaaaggtgctgatggttctcctggcaaagatggtgtccgtggt
ctgactggccccattggtcctcctggccctgctggtgcccctggtgacaagggtgaagct
ggtcctagcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgag
cctggtccccctggtcctgctggcttcgctgggccccccggtgctgacggccaacctggt
gctaaaggtgaacccggtgatgctggtgctaaaggcgacgctggtccccctggccctgct
ggacccactggacctcccggccccattggtaacgttggtgctcctggacccaaaggtgct
cgtggcagcgccggtccccctggtgctactggtttccctggtgctgctggccgcgtcggt
ccccccggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaa
ggcggcaaaggcgcccgtggtgagactggccctgctggacgtcccggtgaagtcggtccc
cctggtccccctggccctgctggcgagaaaggatcccctggtgctgatggacccgctggt
gctcccggcactcccggacctcaaggcattgctggacagcgtggtgtggtcggtctgccc
ggtcaacgaggagaaagaggcttccctggtcttcccggcccctctggcgaacctggcaaa
caaggtccttctggaacaagtggtgaacgtggtccccctggtcccatgggcccccctgga
ttagctggaccccctggcgagtctggacgggagggatctcctggtgctgaaggctcccct
ggacgagatggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc
cctggtgcccccggtgcccctggtgctcctggccctgtcggccctgctggcaagaacggt
gaccgcggtgagactggtcctgctggtcctgctggcccaatcggccctgttggtgctcgt
ggtcctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggtgac
agaggcataaagggtcaccgtggcttctctggtcttcagggtcctcctggccctcccggc
tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct
ggctctgctggttctcctggcaaagacggactcaacggtctcccaggccccattggcccc
cccggtcctcgtggtcgcactggtgatgccggtcctgttggtccccctggccctcctgga
ccccctggtccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagcca
cctcaggagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtc
cgtgaccgtgacctcgaggtagacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccctgaaggaagccgcaagaaccctgcccgcacctgccgcgacctcaagatg
tgccactccgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctc
gatgccatcaaggttttctgcaacatggagacaggtgagacctgcgtataccccactcag
ccccaggtggcccagaagaactggtacatcagcaagaaccccaaggagaagagacacgtc
tggtacggcgagagcatgaccgacggattccagttcgagtatggtggccagggctccgat
cctgccgatgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccag
aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc
aagaaggccctgctcctccagggttccaacgagatcgagatccgggccgagggcaacagc
cgcttcacctacagtgtcacctacgacggctgcacgagtcacactggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgtttgcccatcatcgatgtggcacca
ttggacgttggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctg
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (53)   

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