KEGG   Canis lupus familiaris (dog): 476624
Entry
476624            CDS       T01007                                 
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X2
  KO
K11835  ubiquitin carboxyl-terminal hydrolase 4/11 [EC:3.4.19.12]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cfa01002]
    476624 (USP4)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfa04121]
    476624 (USP4)
Enzymes [BR:cfa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     476624 (USP4)
Peptidases and inhibitors [BR:cfa01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   476624 (USP4)
Ubiquitin system [BR:cfa04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    476624 (USP4)
SSDB
Motif
Pfam: UCH Ubiquitin_3 DUSP UCH_1 USP7_C2 USP7_ICP0_bdg
Other DBs
NCBI-GeneID: 476624
NCBI-ProteinID: XP_003432923
Ensembl: ENSCAFG00000024214
VGNC: 48195
UniProt: A0A8C0NPQ3 A0A8I3PV71
Position
20:39818226..39871287
AA seq 917 aa
MAEGGGYRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVG
EHNLFPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVEGQQPIVRK
VVEHGLFVKHCKVEVYLLELKLCENSNPTNVLSCHFSKADTIATIEKEMRKLFNIPAERE
TRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTLQSNGSGFSASY
NCQESPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGM
KGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHE
DLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKV
SVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSRLSG
VAAENMVVTDVYNHRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSADGSECVTLPVYFRER
KSRPSSTSSGAVLYGQPLLVSVAKHKLTLESLYQAVCERISRYIKQPLPEESGSSPLEPG
ACNGSRGSCEGEDEEEMEHQEEGKEQLSETEDSGEDELGGDHEETTQKKVKGQPCPKRLF
TFSLVNSYGTADINSLATDGKLLKLNSRSTLAIDWDSETRSLYYDEQESEAYEKHMSMLQ
PQKKKKTAVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKR
FSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSNHYGAMGVGHYTAYAK
NKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDEFYKTPSLASFPGSSEGGTSPS
SSQQGMGDDEACSMDTN
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggcggaaggtggagggtaccgtgagcggcctgatgcggagacccagaaatccgagctc
ggggccttgatgaggaccacgctccaacgaggggcgcagtggtatcttattgacagccgg
tggttcaagcagtggaagaagtatgtgggtttcgacagctgggatatgtacaatgtgggt
gaacacaatctgtttcctggcccgatagataactctggactcttctcagatcccgagagt
cagacattgaaagaacatttaattgatgaattggactatgtgttggtcccaaccgaggcc
tggaataaattactaaactggtatggctgtgtagaaggccagcagcctattgtcagaaaa
gttgtggagcacggcctgtttgtcaagcattgcaaggtagaggtgtatttgctggaactg
aagctctgtgagaatagcaaccccaccaatgtgctgagttgccatttcagcaaggcagac
accatcgcaaccatcgagaaggagatgcggaagctgttcaacatccctgctgagcgtgaa
acacggctgtggaacaaatacatgagtaatacctacgagcagctgagcaagctagacaac
actgtgcaggatgccgggctataccagggtcaggtgctagtaattgagccccaaaatgaa
gatggcacatggccgagacagaccttgcagtcaaatggatctggcttctctgcttcgtat
aattgtcaggagtccccatcgtctcacatacagcctgggctctgcggacttggaaacctt
gggaacacctgcttcatgaactccgctttgcagtgcttgagcaacactgcaccactgacc
gactactttctcaaagacaaatatgaggctgaaatcaacagagacaaccctttgggaatg
aaaggggaaattgcagaagcctacgcagagctcattaaacagatgtggtctggaagggac
actcatgtggcacctcgcatgttcaaaacccaagtgggacgtttcgcccctcagttttct
ggctaccagcaacaagactctcaggagctgttagcctttcttctagatggattgcatgaa
gatctgaaccgagtaaagaagaaaccctacctggaactgaaggacgccaatgggcggcca
gatgcggtggtggcaaaagaagcctgggagaatcacaggttacggaatgactctgtgatt
gtagacacattccatggcctcttcaaatctactttggtttgcccagaatgtgctaaggtt
tctgtgacctttgacccattttgctatttaactctcccactgcccctgaagaaagataga
gttatggagatctttctggttcctgctgaccctcgctgcagacctacccagtaccgtgtg
gtcgtgccattgatgggggccgtgtctgacctgtgtgaggctctttccaggctgtccggc
gttgctgcagaaaatatggtggtcacagatgtatataatcaccggttccacaaaattttc
caaatggatgaaggtttaaaccacatcatgcctcgggatgacatttttgtgtacgaggtc
tgcagcacctctgctgatggctctgaatgtgtgacacttccagtctacttcagggaaagg
aagtccaggccatcaagtacttcctctggggcggtgctatatgggcagccactcctggtt
tctgttgccaagcacaagctaaccctcgagtccttgtaccaggctgtctgtgagcgtatc
agccgctatatcaaacagcctttgcctgaggagtctggcagctcgcccttggagccgggg
gcctgcaatggctccaggggcagctgtgaaggagaagacgaagaagaaatggagcatcag
gaagaaggcaaagagcagctctcagaaacagaagacagtggggaagacgagctaggaggt
gaccatgaggagaccacccaaaagaaagtcaaaggccagccctgcccaaaaaggcttttt
accttcagccttgtgaactcctatgggacagctgacataaattcccttgcgactgatgga
aaactacttaaactcaactctcgatccacactggccattgattgggacagtgagacccgg
agcctgtattacgatgagcaagagtctgaggcctatgagaagcacatgagcatgttgcag
cctcagaagaagaagaagactgccgtggccctgagagactgcattgagctcttcaccacc
atggagacccttggggagcatgacccctggtattgtcccaactgtaagaagcatcaacag
gccactaagaagtttgacctgtggtccttgccgaagatcctggtagtccacctcaaacgt
ttctcctacaatagatactggagggataagcttgacacagtcgtggaattcccagtcaga
gctctgaacatgtccgagtttgtatgtgacctgtcggcaaggccttatgtgtacgacctc
attgccgtgtctaatcattacggagccatgggagttggccactatactgcatatgcgaag
aacaaactgaacgggaagtggtattattttgatgatagcaacgtgtccctggcctctgaa
gatcagatagtgacaaaagcagcttatgtgctcttttaccaacgtcgagatgatgaattt
tataagacgccttcacttgctagttttcctggatcctctgaaggagggacaagcccaagc
agctcacagcagggcatgggggacgatgaggcttgcagcatggacaccaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (17)   
   UniProt (2)   
   RefSeq(pep) (15)   
DNA sequence (15)   
   RefSeq(nuc) (15)   
Protein domain (6)   
   Pfam (6)   
All databases (69)   

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