KEGG   Canis lupus familiaris (dog): 476881
Entry
476881            CDS       T01007                                 
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03022  Basal transcription factors
cfa03420  Nucleotide excision repair
cfa05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    476881 (GTF2H1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    476881 (GTF2H1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    476881 (GTF2H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    476881 (GTF2H1)
   03400 DNA repair and recombination proteins [BR:cfa03400]
    476881 (GTF2H1)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     476881 (GTF2H1)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     476881 (GTF2H1)
SSDB
Motif
Pfam: PH_TFIIH BSD
Other DBs
NCBI-GeneID: 476881
NCBI-ProteinID: XP_013978133
Ensembl: ENSCAFG00000009171
VGNC: 41547
UniProt: A0A8C0P8L8 A0A8I3NYI3
Position
21:40250242..40286596
AA seq 548 aa
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKSLDEGYGISSVPSTSNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSSIDGNSGDADCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPKLTQ
VLSSSAASSTITTLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHKWQ
SRRLMKKT
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcaacttcatctgaagaggttttgttgattgtgaagaaggtgcgtcaaaagaagcag
gatggagctttatacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttacaatcagccatatgtatgcagatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcaacttcagctggtgttgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagctgtgaaagagcgagatgcagtgaaagaccttcttcagcagctgctg
cccaaattcaagaggaaagcaaataaagagctggaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtgatcagcgctgag
gaattctgggccaatcgtttaaatgtgaatgcaacagagagttcttctacatccaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgaggtacaatttaacctctgatatcattgagtccatatttaggacctat
ccagcagtaaaaatgaagtatgcagaaaatgttcctcacaacatgacagaaaaagagttt
tggacacgtttctttcagtcccattattttcatagggaccgcctgaatacggggtcaaaa
gacctctttgcagaatgtgccaaaattgatgaaaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccactacttgatttgactgctttggaagataaatcattagatgagggc
tatggcatttcttctgtgccatctacttctaattctaaatccataaaggagaatagtaat
gctgccatcatcaagaggtttaaccatcacagtgccatggtccttgcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgaacccagcagcatcgatggaaattctgga
gatgcagattgcttccagcctgcagtcaaaagggcaaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacgattgcactaaacctcaagaagtcagat
aggtattatcacggtccaactccaatccagtcactacaatatgcaacaagtcaggacatt
attaattcttttcaaagtattaggcaagaaatggaagcttatacacccaaattaactcag
gttctctcaagtagtgctgccagtagtactatcacaacgctgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttgaaacacctttatgtggctgttggggaacttctacggcacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggagcgattt
caagttacgaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctccagacagcctacaacaagctccacaagtggcag
tcacggcgtctgatgaagaaaacgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system