KEGG   Canis lupus familiaris (dog): 481479
Entry
481479            CDS       T01007                                 
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X3
  KO
K04558  synphilin-1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa05012  Parkinson disease
cfa05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05012 Parkinson disease
    481479 (SNCAIP)
   05022 Pathways of neurodegeneration - multiple diseases
    481479 (SNCAIP)
SSDB
Motif
Pfam: SNCAIP_SNCA_bd Ank_2 Ank_4 Ank Ank_5 Ank_3
Other DBs
NCBI-GeneID: 481479
NCBI-ProteinID: XP_005626500
Ensembl: ENSCAFG00000000522
VGNC: 46597
UniProt: A0A8I3RUB5 A0A8C0RTJ6
Position
11:11008224..11159094
AA seq 916 aa
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQSEDRSVSSSSWNCNVSALITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKVEYQKGGDPDPGPQPEELS
PGDGENGPQNKSSEPSTLLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSDKRILGLC
TTINGLSGKACSPGSAESSPSNMTPFCVLSPVKSPHLRKASSVIRDQPKLSTEESESSPP
LVKCGSAYEPENQSKDFLNKTFSDPHGRKREKATPDCQLRAFHLQSSATEPKLEEQIGGG
NWTSSQGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHVAASQG
HAECLQHLTSLMGEDCLSERNAEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFP
SLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGA
NVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQN
QLQQLLEAQKSESLLSSPSSPSSPASRRSQWKPPDVDDESVAKGKPGVQEGIQVLGSLSA
SSRARAKVKDEDSDKILRQLLGKDISESVCTQEKLSLEFQDAQASSRNSKKIPAEKRELK
LARLRQLMQRSLSESDTDSNTSEDPKSTPVRKADRPRPQPIVGSVESVDSAESLHLMIKK
HTSASGRRFPFGIKASKSLDGHSPSPTSESSEPDVEAQCPGSGTTPPSQSPGDPTQPSPD
STAAQKVAMSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMGQPSLELNGEKDKDKGRTL
QRTSTSSESGDQLKRPFGTFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTTDA
KGNPVSSASKGKNKAA
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggaagcacctgaataccttgatttggatgaaattgacttcagtgatgatatatcttac
tcagtcacatcactgaagaccatccctgaactgtgccgaagatgtgattcacaaagtgaa
gacagatcagtttctagctcgagctggaattgcaacgtgtcagcactgattacaaacacg
caaaagcccacaggaatcgcggatgtgtacagtaagttccgtcctgtgaagcgagtttcc
ccactgaaacatcaaccagagactctggagaacaatgaaagtgatgaccagaagaaccag
aaggtggagtaccagaaagggggtgatcctgacccaggcccccaacctgaggagctcagc
cctggagatggagaaaatggtccccagaataagagcagcgagcccagcaccttgctgggg
gaactggagcattatgaccttgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagcttgcctctttcaccaaggtgacttcagataagagaattttgggtttgtgc
acaaccatcaatggcctttctggcaaagcctgctctcctggaagtgctgagagctcacca
tccaacatgacaccattctgtgttctttctcctgtgaaaagccctcacttgagaaaagca
tcctctgtcatcagagaccagccaaagctctccacagaggagtctgagagctcgccacct
ctggtaaagtgtggctctgcatatgagcctgaaaaccagagtaaggacttcctaaacaag
acctttagtgatcctcatggtcgaaaacgcgagaaggcaacgccagactgccagctcagg
gccttccatttgcagtcctcagccacagaacccaaactagaagagcagattgggggtggg
aactggaccagctcccaaggcccggaagaaaggagtgaatatctgaaaaaagtgaaaagc
atcttgaacattgttaaggaaggacagatatctctcctgccacacctcgctgccgacaac
ctagacaaaattcacgacgaaagtggcaacaatctcctacatgtggccgcatcacaggga
catgcagaatgtctccagcacctcacgtctttgatgggagaagattgcctcagtgagcga
aatgcagagaagctgactccagcgggcctggccatcaagaatggtcagttggagtgtgtc
cgctggatggtgagtgaaaccgaagccatcgctgagctgagctgttctaaggatttccca
agccttattcattacgcaggttgctttggccaggaaaaaattcttctttggcttcttcag
tttatgcaagaacagggcatctcattggatgaagtggaccaagatggcaacagcgcggtc
catgtagcctcccagcatggctacctcgggtgcatacagacactggttgaatatggagca
aatgtcaccatgcaaaaccatgctggggaaaagccctcccagagcgccgagcgtcatggg
cacacgctgtgctcccggtacctggtggtggtggagacctgcatgtcgctggcctctcag
gtggtgaagctaaccaagcagctgaaagaacagacagtggaacgtgtcacactgcagaac
cagctccagcaacttctagaagcccagaaatcagaatcactcctttcctcacccagttca
ccatcctccccagcttccagaaggtcccagtggaaacctccagatgtggatgatgagtct
gtagccaaaggcaaaccaggagtccaagaagggattcaggttctcggaagcctgtcagca
tccagtcgagctagagccaaggtgaaagatgaggattctgacaaaattctccgccagtta
ctgggaaaagatatctcagagagtgtctgcacccaggaaaagctgtccttagaattccag
gatgcacaagcttcctccagaaactcaaagaagatcccagcagagaagagggaactgaaa
ttagctcggctaaggcagctgatgcagcgctccctgagtgagtctgacacggattccaac
acctctgaggaccccaagagcacgcctgtgaggaaggctgacaggccccgaccacagccc
atcgtgggaagcgtggagagtgtggacagcgcagaaagcttacacctgatgataaagaaa
cacacctcggcgtcgggacgtaggtttccttttggcatcaaggcctccaagtctctggat
ggtcatagcccatctcccacctcagagagcagcgaacctgatgtggaagcccagtgtccc
ggctcagggaccactcccccaagccagtccccgggagaccctactcagcccagccctgac
agcactgctgcccagaaagtggccatgagccccaagagtgccctcaagtctccatcttcc
aagcgccggacatcccagaacttgaaactcagagttacctttgaggagcctgtggtgcag
atgggacaacctagccttgagctaaatggggagaaagacaaagacaaaggcaggaccctc
cagaggacctccacaagtagtgaatcaggggaccaactgaaaaggccttttggaaccttc
cgatctatcatggagacactcagtggcaaccagaacaataataataactaccaggcagcc
aaccagctgaaaacatccacgctgcccttaacctcacttggaaggaagaccacagatgcc
aagggaaatcctgtgagctctgctagcaaaggaaagaataaggcggcataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (75)   
   UniProt (2)   
   RefSeq(pep) (73)   
DNA sequence (73)   
   RefSeq(nuc) (73)   
Protein domain (6)   
   Pfam (6)   
All databases (176)   

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