KEGG   Canis lupus familiaris (dog): 483863
Entry
483863            CDS       T01007                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03020  RNA polymerase
cfa03420  Nucleotide excision repair
cfa05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    483863 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    483863 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    483863 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfa03021]
    483863 (POLR2D)
   03400 DNA repair and recombination proteins [BR:cfa03400]
    483863 (POLR2D)
Transcription machinery [BR:cfa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     483863 (POLR2D)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      483863 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 483863
NCBI-ProteinID: XP_013976953
Ensembl: ENSCAFG00000004311
VGNC: 44795
UniProt: A0A8C0T6R7 A0A8I3P8V7
Position
19:23001261..23021440
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggaggtagcgatccgcgggcgggcgacgtcgaggaggatgcctcacagctc
atctttcccaaagagtttgaaacagcggagacattactaaattcagaagttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaaaactttaaattatacagcccgtttcagccgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtcaaaggcactgataccaagcttggagggg
cggtttgaagatgaggagctacagcagattcttgatgatatccagaccaagcgcagcttt
caatattag

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