KEGG   Canis lupus familiaris (dog): 484961
Entry
484961            CDS       T01007                                 
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04820  Cytoskeleton in muscle cells
cfa04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    484961 (COL5A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    484961 (COL5A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cfa00536]
    484961 (COL5A3)
Glycosaminoglycan binding proteins [BR:cfa00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   484961 (COL5A3)
SSDB
Motif
Pfam: Collagen COLFI Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 484961
NCBI-ProteinID: XP_013977681
Ensembl: ENSCAFG00000017958
VGNC: 39479
UniProt: A0A8C0THI1 A0A8I3PG42
Position
20:50904135..50941637
AA seq 1749 aa
MGSRRGLGQPRAGLCFVLASLQLLLRTQAEDPVDVLKALGVRGGQAGVLDGPGLCPQRAP
EGDRAFRVGKATILGIPTWELFPDGHFPENFSVLITLRGQPANQSVLLSIYDESGIRQLG
LALGPALGLLGDSFSPLPQQVNLMDGRWHRVAVSVDGRMVTLVADCEPQPPILGQGPRFI
SAAGLTVLGTQDLGEETFEGDVQELLISPDPQAAFQACERYLPGCDNLDPIATGVPQSEP
ETPPPRRKGKGKGKKKGRGRKGKGRKKKNKESLTPSPPPGSLENQTFTDIPNTETPASTL
PPTSTPLVITTTVTIGLNATMLEGGLDPDNGTELKTLKTKLAKEDQEGDGPTMGPDFRAA
EQPSQTQFQIFPGGGEKGAKGEPAVIEQGQKFEGPPGAPGPRGVVGPSGPPGPPGFPGDP
GLPGPAGLPGMPGIDGIRGLPGTVIMMPFQFASSSLKGPPVSFQQAQAQAVLQQAQLSMK
GPPGPVGLTGRPGPVGLPGYPGQKGEMGDIGPQGPRGLQGPLGPPGREGKMGRSGADGAR
GLPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGPPGEDGKKGAEGPPGPTGQAGEP
GPRGLIGPRGSPGPLGRPGVVGIDGAPGAKGNVGPPGEPGPPGQQGNPGSQGLPGPQGPI
GTPGEKGPPGNPGIPGVPGSDGPPGHPGHEGPTGEKGAQGPPGSAGPPGYPGPRGVKGTS
GNRGLQGEKGEQGEDGFPGFKGDGGPKGDRGHPGPPGPRGEDGPEGLKGQEGLAGEEGPP
GSAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGLEGERGPPGSR
GERGQPGATGQPGPKGDVGQDGAAGIPGEKGLPGLQGPPGFPGPKGPPGPQGKDGRPGHP
GQRGELGFQGQTGPPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGIK
GDLGPPGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGSPGERGPVGPA
GGIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGLRGPPGAVGPSGEDGDK
GEVGAPGNKGSKGDKGDAGPPGPTGVRGPVGHPGSPGADGAQGRRGPPGLFGQKGDDGVR
GFAGVIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGPHGPSGPEGPPGLPGGVGQP
GAVGEKGEPGEAGDPGPPGTPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGEDGAKGNV
GPTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGPPGPPGKRGPSGRV
GREGREGEKGAKGEPGPDGPPGMTGPVGARGPPGRMGPEGLRGIPGPVGEPGLLGPPGQM
GPPGPLGPSGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGEP
GPPGPIGSLGHPGPPGVAGPLGQKGSKGSPGSFGPRGDTGPPGPPGPPGPPAELHGLRRR
RRSLPGPGALEAPEGGMEEVLASLTSLSFELEQMRRPPGTAERPGLVCSELYRNHPHLPD
GEYWIDPNQGCARDALRVFCNFTAGGETCLYPDKKFETVKMASWSREKPGNWYSTFRRGK
KFSYVDADGSPVSVVQMTFLKLLSATAHQSFTYTCQNSAAWLDEAAGDHGRSVRFLGANG
EELSFNQTTAATITVPYDGCRLRKGQTKTLLEVSSSRVGFLPLWDVAAADFGQTNQKFGF
ELGPVCFSS
NT seq 5250 nt   +upstreamnt  +downstreamnt
atggggagtcgccgaggcctgggccagccgcgggccggcctctgcttcgtcctggcttcg
ctgcagcttctgctccggacgcaggccgaagaccctgtggatgtgctaaaggccctgggc
gtgcgagggggccaggctggggtccttgacgggcctggcctctgtccccagagggcccca
gagggtgaccgggcattcagggttggcaaggcgaccatacttggcatccccacatgggag
ctctttccagatgggcactttcctgagaacttttctgtgctgatcaccctgcggggccag
ccagccaaccagtctgtccttctatccatctatgacgagagtggtattcgacagctgggc
ctggctctggggccagccctgggtctcctaggtgactccttcagccccctcccccagcaa
gtcaacctcatggatggcaggtggcaccgtgtggcagtcagtgtggatggcaggatggtg
actctggtagctgactgtgaacctcagccccccatattgggccaggggccacgattcatt
agcgcagctggactcactgtgttggggacccaggaccttggggaggagacttttgaggga
gatgttcaggagttgctgataagcccagatcctcaggctgccttccaggcctgtgagagg
taccttcctggctgtgacaacctggatcctatagccacaggggtccctcaaagtgagcca
gaaactcctccccctcgacggaaggggaagggaaaaggaaagaaaaaagggcgaggccgc
aaggggaagggcaggaagaagaagaataaggaaagtttgacgccaagtccacctcctggg
tccctggagaaccagaccttcactgacatccctaatacagagacaccagcttcaactctg
cctccgacttctacacctttggtcatcaccaccactgtgaccattggcctcaatgccacc
atgctagaggggggcctggatcctgacaatggaactgaactaaagaccctgaagactaag
ttagccaaagaggaccaagaaggagatggccccaccatgggccccgacttccgggcagca
gaacagccatcacagacacagtttcaaatctttcctggtggtggagagaaaggagcaaaa
ggagagccggcagtgattgaacagggacagaagtttgagggacctccaggagccccagga
cctcgaggggtggttggcccctcaggccctcctggccccccaggattccctggagaccct
ggtctgccgggtcctgctggcctcccaggaatgcctggcatcgatgggatccggggtcta
ccagggactgtgatcatgatgccgttccagtttgcaagcagctccctcaaaggaccccca
gtctccttccagcaagcccaggctcaggcagtactgcaacaggctcagctgtctatgaaa
ggtccccctggtccagtagggctcactgggcgcccaggccctgtgggtctccctgggtat
ccgggtcagaaaggagagatgggagacatagggccacagggtccccgaggccttcaggga
cctcttgggcctcctggccgggagggaaagatgggccgctctggagcagatggggctcgg
ggccttccaggggacacaggacctaagggtgatcggggctttgatggcctaccagggctg
cctggtgagaagggccaaaggggtgactttggccatgtgggacaacctggccccccagga
gaggatggtaagaagggagcagaaggacctccggggcccactggccaagctggggagcca
ggcccccgaggactgatcggccctagaggctcccctggtcccctgggacgcccgggtgta
gttggaattgatggtgctccaggagccaaaggaaatgtgggtcctccaggagaaccaggc
cctccaggacagcagggaaatcctgggtcccagggactccctggccctcagggacctatt
ggcactcctggggagaagggtccccctggaaacccaggaattccaggcgtcccgggatct
gatggccctccgggtcacccaggccatgagggccccacaggagagaaaggggcacagggt
ccaccagggtcagcaggaccaccgggctatcctggacctcggggtgtgaagggtacctct
ggcaaccggggcctccagggggagaaaggagagcagggagaggatggctttcctggcttc
aagggcgatggggggcctaaaggagatcgggggcaccccggaccccccggaccccgggga
gaggatggtccagaagggctgaagggacaggaggggctggctggcgaggaggggccccca
ggctcagctggggagaagggcaagcttggggtgccaggtctcccgggttacccaggacgt
ccaggccctaagggctctactggctttcccgggcccctgggaccattaggagaaaaaggg
aaacgggggaaggcagggcagccaggcctggaaggagagcggggaccaccaggctcccgt
ggagagagggggcagccaggtgccaccgggcagccaggccccaagggcgatgtgggccag
gatggggccgctgggatccctggagaaaagggcctcccaggtctgcaaggccctcctgga
tttcctgggccaaagggtcctcctggcccccaggggaaagatgggcgtcctgggcaccct
ggccagagaggagaattgggcttccaaggccagacgggcccccctggaccagctggtgtc
gtgggtcctcagggaaagacaggagaagcaggacctctgggtgagagaggccccccgggc
cctcctggacctcctggtgaacaaggtcttccgggcctggaaggcagagagggcatcaag
ggggacctgggaccaccgggaccccttgggaaggaaggaccacctggacccaggggcttc
cccggcccccaaggagcccctggggacccagggcctattggtttaaagggtgacaaaggc
cccctgggccctgttggagccaatggctccccaggggagcggggtccagtgggcccagca
ggaggcatcgggcttcctggccaaagtggaggccaaggccctgttggccctgcaggcgag
aaggggtccccgggtgaacgtggcccccctggccccacagggaaagatgggatcccaggg
cccctggggcttcggggaccccctggagctgttgggccttctggcgaggatggggacaag
ggggaggtgggtgcccctggtaacaaagggagcaaaggcgataaaggggatgcgggccca
cctggaccaactggtgtacggggtcctgtgggacacccaggctccccgggagcagatggg
gctcaggggcgcaggggaccaccaggcctctttgggcagaaaggagatgatggagtgaga
ggctttgctggggtgattggcccccctggcctacaggggctgccaggccctcctggagag
aaaggggaggtcggagatgtagggtccatgggtccccatggagctccagggcctaggggt
ccccatggccccagtggaccagagggccctccagggctgcctgggggagttggtcagccg
ggtgctgtaggcgagaagggtgagccaggggaggctggagacccaggacccccaggaacc
ccaggcatccctgggcccaagggagaaattggtgaaaagggagactcaggcccatctggg
gctgctggacccccaggcaagaaaggtccccctggagaggatggagccaaagggaatgtg
ggccccactgggctcccaggagatctaggaccccctggagaccctggagtttcgggtatc
gatggctccccaggagagaagggagaccctggtgatgttgggggaccgggtccacctggg
gcttctggggaacctggcccccctgggcctcctggcaagaggggtccttcaggtcgtgtg
ggtcgagaaggcagagaaggggagaaaggagccaagggggagccaggtcctgacggaccc
ccagggatgacaggcccagtgggggctcgagggccccctggacgtatggggcctgagggt
cttcgagggatccccggccctgtgggtgaaccaggtctcctgggtcctcctggacagatg
ggccctcctggacccctggggccctctggccttccaggattgaagggagatgctggcctc
aagggggaaaagggccacattggattaattggcctcatcggtccccctggggaagctggt
gagaaaggggatcaggggttgccaggcgtgcagggcccccctggccccaagggagaacct
ggtccccctggtcccattggctctctgggccaccctgggcccccaggcgtggcgggtcct
ctagggcagaaaggctccaaggggtccccgggatcctttggtccccgtggtgacactggc
ccccctggcccccctggccctccgggtcccccagctgagctgcacgggctgcgcaggcgc
cggcgctctctcccaggcccaggggcgctcgaggccccggagggcggcatggaggaggtg
ttggcctcactcacatcgctgagctttgagctggagcagatgcggcgccctccgggcacc
gctgagcgcccaggcctcgtgtgcagtgagctgtaccgcaatcacccacacttgcctgat
ggggagtactggattgaccccaaccagggctgtgcgagggatgcgctcagggttttctgc
aacttcacggcaggaggagagacctgtctctacccggacaagaagtttgagacagtaaaa
atggcctcctggtccagggaaaagccaggaaactggtatagcacattccgacgagggaag
aagttctcctatgtggacgccgatgggtccccggtgagtgtggtacagatgaccttcctg
aagttgctgagtgccacagcccaccagagcttcacctacacctgccagaactctgccgcc
tggctggacgaagctgcgggcgaccacggccgttctgtgcgcttccttggggccaacggg
gaggagctgtctttcaaccagacgacagcggccaccatcaccgtcccctacgatggctgc
cggctccggaagggacagacgaagaccctcttggaggtcagctcttcccgagtggggttt
ctgcctctgtgggacgtggcagctgctgactttggccagacgaaccagaagtttgggttt
gaactgggccctgtctgctttagcagctga

  All links  
Gene (33)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (32)   
   UniProt (2)   
   RefSeq(pep) (30)   
DNA sequence (40)   
   RefSeq(nuc) (40)   
Protein domain (4)   
   Pfam (4)   
All databases (109)   

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