KEGG   Canis familiaris (dog): 485469Help
Entry
485469            CDS       T01007                                 

Definition
(RefSeq) protocadherin-8 isoform X1
  KO
K16499  protocadherin delta 2
Organism
cfa  Canis familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cfa04515]
    485469
Cell adhesion molecules [BR:cfa04515]
 Cadherins
  Protocadherins
   485469
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Cadherin Cadherin_2
Motif
Other DBs
NCBI-GeneID: 485469
NCBI-ProteinID: XP_542588
Ensembl: ENSCAFG00000004836
UniProt: E2RM28
Position
22
AA seq 1072 aa AA seqDB search
MGPAGRGGSPCLLPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
ASFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDINDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRASTCKVIVRIRDVNDNAPDITITPLA
APGAPAASPFAAAAAAAAAALGGADATSPTGPGTPEAGAVSLVPEGAARESLVALVSTSD
RDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLR
TVRPYTVRVSDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLE
AEVGRAGGSVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVR
VLDQNDHAPVLVHPAPANGTLEVAVPGRTARDTAVARVQARDADDGANGELAFELLQQEP
REAFAIGRRTGEIVLTGDLSQEPPGRAFRALLVVSDGGRPPLSTTATVSFVVTAGGGRGP
GAPASAGGPERSRPPGSRLAASGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRK
KEVRKGGARREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGSGKAPFGSPAAD
PPPPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKG
HSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKIL
GHSDRCWSPSCGGPNTHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVY
EKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKEANENV
NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt
atgggtccagcggggcgcgggggcagcccctgccttctccctttacagctcttcagcctc
tgctgggtgctctcggtggcccagagcaagacagtgcgatacagcaccttcgaggaggac
gcccccggcacggtcatcgggaccctggccgaggacctgcatatgaaagtgtccggagac
gccagcttccgcctgatgaagcagttcaacagctcgctgctccgggtgcgcgagggcgac
gggcagctgaccgtcggggacgcgggcctggaccgcgagcggctgtgcggccaagcgcca
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccggctggtgcac
gtggaggtggaggtgagggacatcaacgaccacgcgccgcgcttcccccgggcccagatc
cccgtggaggtgtcggagggcgcggccgtgggcacgcgcatccccctggaggtgccggtg
gacgaggacgtgggggccaacggactgcagagcgtgcgcctggccgagcctcacagcccc
ttccgcgtggaactgcagacgcgcgcggacggcgcccagtgcgcggacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctggtggcccaggacggc
ggccgcccgccgcgctccgccacggccgccctcagcgtgcgggtgctggacgccaacgac
cacagcccggccttcccgcagggcgccgtggccgaagtggagctggcggaggacgcgccc
gtgggctcgctgctgctcgacctggacgcggcggaccccgacgagggccccaacggcgac
gtggtgttcgccttcggggcccgcaccccgcccgaggcgcgccgcctcttccgcctggac
ccgcgctccggccgcctcaccctggcgggacccgtggactacgagcgccaggacacctac
gagctggacgtgcgcgcccaggaccgcggccccgggccccgggcctccacctgcaaggtc
atcgtgcgcatccgcgacgtcaacgacaacgctccggacatcaccatcaccccgctggcc
gccccgggcgcacctgccgcctctcccttcgccgcggccgccgccgccgccgccgccgct
ctcgggggtgcggacgcgacctcgcccaccgggcccgggacgccggaggcgggcgccgtc
tccctggtgccagagggggcggcgcgcgagagcctggtggcgctggtcagcacctcggac
agggactcgggcgccaacgggcaggtgcgctgcgccctctacgggcacgagcacttccgg
ctgcagccggcctacgcgggcagctacctggtggtgaccgcggcgtcgctggaccgcgag
cgcatcgccgagtacaacctgacgctggtggccgaggaccgcggcgcgcccccgctacgc
accgtgcggccctacaccgtgcgcgtgagcgacgagaacgacaacgcgccgctcttcacg
cggccagtctacgaggtgtcggtgcgtgagaacaatccgcccggcgcctacctggccacg
gtggccgcgcgggacccggacctgggccgcaacggccaggtcacctaccggctgctggag
gcagaagtgggccgcgccgggggctcggtgtccacctacgtgtcggtggacccggccacc
ggggccatctacgcgctgcgcagcttcgactatgagacgctgcgccagctcgacgtgcgc
atccaggcgagcgacggaggctccccgcagctctccagcagcgccctggtgcaggtgcgg
gtgctggaccagaacgaccacgcaccggtcctggtgcacccggcgccggccaacgggacc
ctggaagtggcggtccccgggcgcacggcgagggacacggccgtggcgcgcgtgcaggct
cgggacgcggacgacggtgccaacggggagctggcgttcgagctgctgcagcaggagccg
cgagaagccttcgccatcggccgccgcacgggggagatcgtgctcacaggcgacctctcg
caggagccgccgggccgcgcgttccgggcgctgctggtcgtgtccgacggcggccgcccc
ccgctctccaccaccgccaccgtcagcttcgtggtgaccgcgggcggcgggcgcgggccg
ggggcgcccgccagcgcggggggcccggagcgatctcgcccgcctggctcgcggctcgcg
gcgtcggggccggcgctgcagtgggacacgccgctgatcgtcatcatcgtgctggccggg
agctgtacgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaag
aaggaggtgcgcaaagggggggcccgccgggaagagcggcccggggcggcgggcggcgga
gcctcggctcccggctccccggaggaggctgcccggggagccgggcccaggcccaacatg
ttcgacgtgctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgac
ccgcccccgcccgcggtcgccgcggccgaagtgccgggctcggagggcggcagcgccacc
ggggaaagctcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccc
tacggcgcctcgcccggcttcggaaaggagccggcgccccctgtggcggtctggaaagga
cactccttcaacaccatctcgggccgggaagcggagaagttcagcggcaaagacagcggt
aaaggggacagcgacttcaacgacagcgattccgacatcagcggggacgctctgaaaaag
gatctcatcaaccacatgcagagcggactgtgggcgtgtaccgcggagtgtaagatcctg
ggccactctgaccgctgctggagcccgtcatgcggagggcccaacacgcatcccccacct
cacccgccagcccagatgtctaccttctgtaagagcacgtccctgcctcgggatcctctg
cgcagggacaattactaccaggcccagctgcccaagacggtggggctgcagagcgtctat
gagaaagtgctgcatagggactacgacaggacagtcactctgctctcccctccccgtccg
gggaggctcccagacttgcaggagatcggggtacccctctatcagtccccccctggcagg
tacctgtccccaaagaaggaagccaatgaaaatgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system