KEGG   Canis lupus familiaris (dog): 486900
Entry
486900            CDS       T01007                                 
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cfa03016]
    486900 (TRUB1)
Enzymes [BR:cfa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     486900 (TRUB1)
Transfer RNA biogenesis [BR:cfa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    486900 (TRUB1)
 Prokaryotic type
    486900 (TRUB1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-GeneID: 486900
NCBI-ProteinID: XP_005637816
Ensembl: ENSCAFG00000011688
VGNC: 47888
UniProt: A0A8C0TM03 A0A8I3SCV0
Position
28:25840773..25879714
AA seq 350 aa
MAATEAAVVPSSSLETDTALVPETAGTPAATAATSPATAAAAAVTAAARTGPDARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTGMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKTY
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcagctaccgaggcggcggtggtaccgtcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacacccgccgcaacggccgccacctccccagcgacggctgca
gccgcggccgtgacggccgctgccaggaccggacccgacgccagggtctccaaggccgct
ctggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaaacagactttgaaaattggacatggagggacacta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
ggtatgttgtcagggtccaagaggtatattgccattggagaactggggaaagctactgac
acactagactctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttgatgaagagaggcgaagtagta
gaagcaaaacctgccaggcctgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggtaaagaactctcttcctgtgccaatgtcctagagctgacccgaaccaaacag
ggaccatttacactagaagagcacgctctgcctgaagacaaatggacgattgatgacatt
gcacagtctctggaacattgctcatctcttctcccagcagaattggcacttaaaaaatca
aaacctgaggaatctaatgaacaagttttgagctgtgaatatataacgctcagtgagaca
aagggagaagatgatgtcattaagacatattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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